Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15l16
(569 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome be... 164 5e-41
Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical pr... 82 2e-16
Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical pr... 67 7e-12
AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome al... 36 0.020
Z81079-4|CAB03081.1| 236|Caenorhabditis elegans Hypothetical pr... 33 0.11
Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z83216-9|CAB05678.1| 111|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z82086-8|CAN99701.1| 309|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z82086-7|CAB04996.1| 294|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical pr... 27 9.5
>AC006672-3|AAK84540.1| 239|Caenorhabditis elegans Proteasome beta
subunit protein 1 protein.
Length = 239
Score = 164 bits (398), Expect = 5e-41
Identities = 73/151 (48%), Positives = 103/151 (68%)
Frame = +3
Query: 117 STGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAIAD 296
STGT+++A E++GGVV+G DSRT+ G++I +R T+K+T ITD + CRSGSAADTQAIAD
Sbjct: 21 STGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIAD 80
Query: 297 IVTYHLNFHKMELGDPPLVETAAAIFRELCYNYRDSLMAGILVAGWDKKKGAQIYSIPIG 476
I YH++ + M P + ++ IFR+ YNYR+ L A +LVAGWD++ G Q+Y+IPIG
Sbjct: 81 IAKYHIDVYTMTENKPVTIYRSSQIFRQFLYNYREQLSASVLVAGWDEELGGQVYAIPIG 140
Query: 477 GMVQRQAXXXXXXXXXXXXXXXDANFKPNMT 569
G V RQ D+ ++PN+T
Sbjct: 141 GFVSRQRSTASGSGSTFVQGFLDSQWRPNLT 171
>Z99709-4|CAB16855.1| 277|Caenorhabditis elegans Hypothetical
protein C47B2.4 protein.
Length = 277
Score = 82.2 bits (194), Expect = 2e-16
Identities = 47/151 (31%), Positives = 77/151 (50%)
Frame = +3
Query: 117 STGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAIAD 296
STGT+I+A F GG+V+GADSR T G IA++ +K+ K+T+ IY C +G+AAD +
Sbjct: 44 STGTTIVAVAFKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADLDQVTK 103
Query: 297 IVTYHLNFHKMELGDPPLVETAAAIFRELCYNYRDSLMAGILVAGWDKKKGAQIYSIPIG 476
+++ +L ++ G V TA ++ +NY+ + A +L+ G D G +Y
Sbjct: 104 MLSGNLRLLELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVD-PTGPHLYMCSAN 162
Query: 477 GMVQRQAXXXXXXXXXXXXXXXDANFKPNMT 569
G + +FK +MT
Sbjct: 163 GTTMAFPFTAQGSGSYAAITILERDFKVDMT 193
>Z81564-1|CAB04567.1| 284|Caenorhabditis elegans Hypothetical
protein K05C4.1 protein.
Length = 284
Score = 67.3 bits (157), Expect = 7e-12
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Frame = +3
Query: 153 GGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAIADIVTYHLNFHKME 332
GG+++ DSR ++G YI+++ K+ I D++ +G AAD Q IV + +++
Sbjct: 81 GGIIVAVDSRASSGEYISSKSVMKILDIGDRMVATMAGGAADCQFWTRIVAKYCTLYELR 140
Query: 333 LGDPPLVETAAAIFRELCYNYR-DSLMAGILVAGWDKKKGAQIYSIPIGGMVQRQAXXXX 509
V A+ F Y YR L G +VAG+D KKG QI+ + G +
Sbjct: 141 EKTSITVSAASKYFANTLYGYRGQGLSVGSMVAGYD-KKGPQIFKVDSEGDRCQLKVCSV 199
Query: 510 XXXXXXXXXXXDANFKPNMT 569
D ++KP MT
Sbjct: 200 GSGSLNAYGILDNHYKPKMT 219
>AC006708-4|AAF60416.2| 250|Caenorhabditis elegans Proteasome alpha
subunit protein 3 protein.
Length = 250
Score = 35.9 bits (79), Expect = 0.020
Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 9/116 (7%)
Frame = +3
Query: 156 GVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAIADIVTYHLNFHKMEL 335
G+V+ A+ + + +T+K+ +++D I C +G AD + + + + ++
Sbjct: 42 GIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSY 101
Query: 336 GDPPLVETAAAIFRELCYNYRDSLMAG--------ILVAGWDKKKGAQIY-SIPIG 476
G+ VE + + LC + G +L GWDK G Q+Y S P G
Sbjct: 102 GEEMPVE---QLVQNLCNEKQRYTQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSG 154
>Z81079-4|CAB03081.1| 236|Caenorhabditis elegans Hypothetical
protein F39H11.5 protein.
Length = 236
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 111 PHSTGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAI 290
P TGTS++A ++ GVV+ D + G + + K+ D + G AD +
Sbjct: 13 PTCTGTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDNVLIAFGGDHADFHWL 72
Query: 291 ADIV 302
+++
Sbjct: 73 QNVI 76
>Z81035-5|CAB02738.1| 246|Caenorhabditis elegans Hypothetical
protein C15H11.7 protein.
Length = 246
Score = 29.1 bits (62), Expect = 2.4
Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 5/129 (3%)
Frame = +3
Query: 108 APHSTGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQA 287
A +ST + +A + VI R +A+ VT + +I+ + CC G D +
Sbjct: 31 AINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTS-VYQISQSVGCCAIGMIPDAKF 89
Query: 288 IADIVTYHLNFHKMELGDPPLVETAAAIFRELCYNYRD-----SLMAGILVAGWDKKKGA 452
K + G E A +L Y SL +L +D +KG
Sbjct: 90 QIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGP 149
Query: 453 QIYSIPIGG 479
++Y + G
Sbjct: 150 EVYRVDPAG 158
>Z82265-5|CAB05175.1| 334|Caenorhabditis elegans Hypothetical
protein F02H6.7 protein.
Length = 334
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 363 AAIFRELCYNYRDSLMAGILVAGW-DKKKGAQIYSIPIG 476
A+ FRE Y+Y L VAGW DK +I P G
Sbjct: 248 ASNFRESFYSYNYKLEKDSAVAGWIDKAGNCEIADFPTG 286
>Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical
protein B0365.6 protein.
Length = 545
Score = 27.9 bits (59), Expect = 5.4
Identities = 23/99 (23%), Positives = 36/99 (36%)
Frame = +3
Query: 93 PEWMSAPHSTGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSA 272
P W+ S + +C++D D G Y L ++ + +Y SGS
Sbjct: 79 PYWLGIKCSLSGNPASCQWD-------DQSGNAGGYNGFAPGYPLVEVGNCVYVPTSGSF 131
Query: 273 ADTQAIADIVTYHLNFHKMELGDPPLVETAAAIFRELCY 389
A D T LNF P+ +T + + CY
Sbjct: 132 AGKWLSGDCNTMSLNFICETAPTSPITDTCSFQYNGNCY 170
>Z83216-9|CAB05678.1| 111|Caenorhabditis elegans Hypothetical
protein C08F11.11 protein.
Length = 111
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 141 CEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAIADI 299
CE+ G + + DS YI +VT ++ + CR+ + +++ AD+
Sbjct: 43 CEYTGDLTVKTDSTCNHSTYIMTKVTPPNESPSNGVAHCRT-APCNSEDYADV 94
>Z82086-8|CAN99701.1| 309|Caenorhabditis elegans Hypothetical
protein ZK228.4b protein.
Length = 309
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 399 DSLMAGILVAGWDKKKGAQIYSI 467
++L+AG+ +A WD K +YSI
Sbjct: 56 NNLVAGVSLARWDAKNDGPLYSI 78
>Z82086-7|CAB04996.1| 294|Caenorhabditis elegans Hypothetical
protein ZK228.4a protein.
Length = 294
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +3
Query: 399 DSLMAGILVAGWDKKKGAQIYSI 467
++L+AG+ +A WD K +YSI
Sbjct: 41 NNLVAGVSLARWDAKNDGPLYSI 63
>Z74030-2|CAA98441.1| 231|Caenorhabditis elegans Hypothetical
protein D1054.2 protein.
Length = 231
Score = 27.1 bits (57), Expect = 9.5
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = +3
Query: 222 KLTKITDQIYCCRSGSAADTQAIADIVTYHLNFHKMELGDP----PLVETAAAIFRELCY 389
K+ +I+ I C SG D + + ++M G+ LV AA+ +E
Sbjct: 60 KVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQ 119
Query: 390 NYR-DSLMAGILVAGWDKKKG 449
+ A +L+AGWDK G
Sbjct: 120 SGGVRPFGASLLIAGWDKNPG 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,661,924
Number of Sequences: 27780
Number of extensions: 260286
Number of successful extensions: 744
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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