Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15k14
         (542 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35641-1|CAA84706.2|  863|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AC024214-5|AAF36077.2|  605|Caenorhabditis elegans Hypothetical ...    28   3.8  
AC024214-3|AAU05554.1|  577|Caenorhabditis elegans Hypothetical ...    28   3.8  
Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AC024214-4|AAM97985.2|  603|Caenorhabditis elegans Hypothetical ...    28   5.0  
AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    27   6.6  

>Z35641-1|CAA84706.2|  863|Caenorhabditis elegans Hypothetical
           protein C38H2.1 protein.
          Length = 863

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 276 MMMDCFGLLLSRLDGKPPERLVCATCVMRIR 368
           + ++CF LL+ R  GK P+R   + C++ +R
Sbjct: 710 LTLECFSLLMLRQRGKFPQRPGMSKCLLNLR 740


>AC024214-5|AAF36077.2|  605|Caenorhabditis elegans Hypothetical
           protein Y77E11A.7a protein.
          Length = 605

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -3

Query: 345 RRPASQVAFRPGETVRGRSSPSSCQNKLLSSHYFRILYSEHDI 217
           +R A+  +F  GET+  +SS  S  NK     YFR  Y EH++
Sbjct: 150 KRVAAATSFT-GETLNLKSSDLSIPNKAAHFLYFR-CYEEHEV 190


>AC024214-3|AAU05554.1|  577|Caenorhabditis elegans Hypothetical
           protein Y77E11A.7c protein.
          Length = 577

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -3

Query: 345 RRPASQVAFRPGETVRGRSSPSSCQNKLLSSHYFRILYSEHDI 217
           +R A+  +F  GET+  +SS  S  NK     YFR  Y EH++
Sbjct: 122 KRVAAATSFT-GETLNLKSSDLSIPNKAAHFLYFR-CYEEHEV 162


>Z93380-3|CAB07600.1|  339|Caenorhabditis elegans Hypothetical
           protein F28C12.4 protein.
          Length = 339

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = -1

Query: 275 VRINFFLPIIFVFYIQNTTFLYRTTTSTQTRIKYWTFALRDAH 147
           V+IN F   I VF I  T F+Y     ++ +IK  +++L + +
Sbjct: 194 VKINDFRTTIMVFCIIVTIFIYYLNVKSEKQIKRTSYSLGEQY 236


>AC024214-4|AAM97985.2|  603|Caenorhabditis elegans Hypothetical
           protein Y77E11A.7b protein.
          Length = 603

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 17/43 (39%), Positives = 24/43 (55%)
 Frame = -3

Query: 345 RRPASQVAFRPGETVRGRSSPSSCQNKLLSSHYFRILYSEHDI 217
           +R A+  +F  GET+  +SS  S  NK     YFR  Y EH++
Sbjct: 148 QRVAAATSFT-GETLNLKSSDLSIPNKAAHFLYFR-CYEEHEV 188


>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 27.5 bits (58), Expect = 6.6
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +3

Query: 168 GPIFDPGLCRCCGSIKKCRVLNIEY-ENNGKKEVYSDM-MMDC 290
           GPI D G C CC       ++   Y  ++GK +  SD  + DC
Sbjct: 165 GPIKDQGQCACCWGFAVTALVETVYAAHSGKFKSLSDQEVCDC 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,903,277
Number of Sequences: 27780
Number of extensions: 252241
Number of successful extensions: 719
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)