Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15k11
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like ... 30 0.95
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 29 1.7
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z68118-6|CAA92187.1| 311|Caenorhabditis elegans Hypothetical pr... 29 2.9
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 29 2.9
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 29 2.9
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 29 2.9
AF016430-3|AAB65369.1| 370|Caenorhabditis elegans Hypothetical ... 29 2.9
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 28 5.1
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z29094-16|CAA82345.2| 184|Caenorhabditis elegans Hypothetical p... 28 5.1
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 28 5.1
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 28 5.1
AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog... 28 5.1
Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z49071-6|CAA88876.2| 292|Caenorhabditis elegans Hypothetical pr... 27 8.9
>AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like
protein family protein7 protein.
Length = 318
Score = 30.3 bits (65), Expect = 0.95
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 139 STATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSPILSTEEIQQKPKMIQEPK 306
S ++R HNDR+ N++ + P R K S N+ + S+ E + + I E +
Sbjct: 188 SIEQVRREEHNDRIGHKNVLEIIIPPPLRSKYMSRNTIVESSREKVPEKEEIDEKR 243
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
assigned gene nameprotein 278 protein.
Length = 1130
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +1
Query: 70 IGGSWPPAP---REPEC----ADYGSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRI 228
+GG PP+P R P + +S+HS A+ + + N + S ++H+A + R
Sbjct: 52 VGGPAPPSPVLRRAPSGPISPSPISPVSQHSRASSRHDIDNTSLLSILKLSHVARESSR- 110
Query: 229 KSTSSNSPILSTEEIQQKPKMIQEPKTV 312
++ +NSP + E + K K+ +TV
Sbjct: 111 NTSRNNSPQPAGRETELKRKIQTLEETV 138
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 196 IAHLAPDRRRIKSTSSNSPILSTEEIQQKPKMIQEPKTVE 315
+A L+P S+S IL + E ++K K ++EP +E
Sbjct: 511 MASLSPSNSSDSSSSVRQDILESSEFEEKLKKLEEPPILE 550
>Z68118-6|CAA92187.1| 311|Caenorhabditis elegans Hypothetical
protein R01E6.6 protein.
Length = 311
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 514 QSTSQLRSNVDLHL*QPPPGIPRRFHLVKYLPKLLESAPQPE 389
Q+ ++ S V LH+ P IP ++ L +LL+ A QP+
Sbjct: 263 QTPGEIHSEVCLHIPLSPHHIPANEMVLTLLQRLLQQAAQPD 304
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 196 IAHLAPDRRRIKSTSSNSPILSTEEIQQKPKMIQEPKTVE 315
+A L+P S+S IL + E ++K K ++EP +E
Sbjct: 482 MASLSPSNSSDSSSSVRQDILESSEFEEKLKKLEEPPILE 521
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 196 IAHLAPDRRRIKSTSSNSPILSTEEIQQKPKMIQEPKTVE 315
+A L+P S+S IL + E ++K K ++EP +E
Sbjct: 511 MASLSPSNSSDSSSSVRQDILESSEFEEKLKKLEEPPILE 550
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = -3
Query: 482 STSVATSTRDPTPISSCKISTEAFGIGATARGEPKAGES*TFSRCSALHTSTKIPVSTVL 303
++S +ST + +S +ST + G+T GE S T S +A T + VSTV
Sbjct: 1061 TSSTGSSTSGESTVSGSTVSTVSGSTGSTITGESTVSGS-TESTVTAESTVSGSSVSTVS 1119
Query: 302 GS 297
G+
Sbjct: 1120 GN 1121
>AF016430-3|AAB65369.1| 370|Caenorhabditis elegans Hypothetical
protein C05C8.2 protein.
Length = 370
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 163 SHNDRVKSANLIAHLAPDRRRIKSTSSNSPILSTEEIQQKPK 288
S ND +K AN A+L R++++S ++ + + KPK
Sbjct: 234 SKNDELKDANWDAYLPNYRKKVQSATTTKEAKKKKAYKMKPK 275
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 524 SMIPIHLTTP**C*STSVATSTRDPTPISSCKIS 423
+MIP+ +T P + TST P PI+S KI+
Sbjct: 348 TMIPVQITCPYCLEKGAETTSTSAPEPIASTKIA 381
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 524 SMIPIHLTTP**C*STSVATSTRDPTPISSCKIS 423
+MIP+ +T P + TST P PI+S KI+
Sbjct: 348 TMIPVQITCPYCLEKGAETTSTSAPEPIASTKIA 381
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 94 PREPECADYGSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRR 225
P E + D S+SKH N+ N V A L H DR R
Sbjct: 2148 PEENDDVDLSSVSKHCALVRSNNTFNFSVNRA-LHIHFVTDRSR 2190
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical protein
ZC116.3 protein.
Length = 3871
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = +1
Query: 94 PREPECADYGSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRR 225
P E + D S+SKH N+ N V A L H DR R
Sbjct: 2148 PEENDDVDLSSVSKHCALVRSNNTFNFSVNRA-LHIHFVTDRSR 2190
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 524 SMIPIHLTTP**C*STSVATSTRDPTPISSCKIS 423
+MIP+ +T P + TST P PI+S KI+
Sbjct: 348 TMIPVQITCPYCLEKGAETTSTSAPEPIASTKIA 381
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 524 SMIPIHLTTP**C*STSVATSTRDPTPISSCKIS 423
+MIP+ +T P + TST P PI+S KI+
Sbjct: 348 TMIPVQITCPYCLEKGAETTSTSAPEPIASTKIA 381
>Z48334-4|CAB61010.2| 426|Caenorhabditis elegans Hypothetical
protein F10B5.4 protein.
Length = 426
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 121 GSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSPILSTEEIQQKPKMIQE 300
GS+ STA M NS D N + D + S S N+P++ T++ +P+M
Sbjct: 33 GSVRTTSTA-MSMNSMKDYPTFDNSLPFSISDNSSV-SVSMNTPLIPTQDPIAQPRMQSM 90
Query: 301 PK 306
P+
Sbjct: 91 PR 92
>Z29094-16|CAA82345.2| 184|Caenorhabditis elegans Hypothetical
protein C07A9.9 protein.
Length = 184
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 106 ECADYGSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSPILSTE 267
+C+D+ S+ KH M R+S D KS L A R I S + L++E
Sbjct: 87 DCSDHSSLCKHCCYEMIRDSIKD-YKSGPLYARCPQCFRNISSLTRRKRRLTSE 139
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 524 SMIPIHLTTP**C*STSVATSTRDPTPISSCKIS 423
+MIP+ +T P + TST P PI+S KI+
Sbjct: 348 TMIPVQITCPYCLEKGAETTSTSAPEPIASTKIA 381
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 524 SMIPIHLTTP**C*STSVATSTRDPTPISSCKIS 423
+MIP+ +T P + TST P PI+S KI+
Sbjct: 348 TMIPVQITCPYCLEKGAETTSTSAPEPIASTKIA 381
>AF143297-1|AAD33902.1| 426|Caenorhabditis elegans tubby homolog
protein.
Length = 426
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 121 GSMSKHSTATMQRNSHNDRVKSANLIAHLAPDRRRIKSTSSNSPILSTEEIQQKPKMIQE 300
GS+ STA M NS D N + D + S S N+P++ T++ +P+M
Sbjct: 33 GSVRTTSTA-MSMNSMKDYPTFDNSLPFSISDNSSV-SVSMNTPLIPTQDPIAQPRMQSM 90
Query: 301 PK 306
P+
Sbjct: 91 PR 92
>Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical
protein K02E2.8b protein.
Length = 173
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = -3
Query: 545 TPAVAVSSMIPIHLTTP**C*STSVATSTRDPTPISS-----CKISTEAFGIGATARGEP 381
T V ++ +PI T P +T+ T+T PT ++ C I T + G G P
Sbjct: 17 TQFVTPTTTVPITTTNPVSTTTTTTTTTTEAPTTTTTVVPIPCNICTSPYNAGCQGMGVP 76
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Frame = -3
Query: 548 STPAVAVSSMIPIHLTTP**C*STSVATSTRDPTPISS-----CKISTEAFGIGATARGE 384
+T A ++ +PI T P +T+ T+T PT ++ C I T + G G
Sbjct: 31 TTTISAPTTTVPITTTNPVSTTTTTTTTTTEAPTTTTTVVPIPCNICTSPYNAGCQGMGV 90
Query: 383 P 381
P
Sbjct: 91 P 91
>Z49071-6|CAA88876.2| 292|Caenorhabditis elegans Hypothetical
protein T22C8.4 protein.
Length = 292
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 130 SKHSTATMQRNSHNDRVKSANLIAHLAPDRRRI-KSTSSNSPILSTEEIQQKPKMIQEPK 306
+ +ST+T + D + ++ +AP RRRI KS++S+ + E K K+ +E K
Sbjct: 60 TSNSTSTSFGSDQMDIENHSPKLSGVAPKRRRIDKSSTSSEAKIQRMEDAMKKKLEKEQK 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,223,617
Number of Sequences: 27780
Number of extensions: 274136
Number of successful extensions: 799
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 799
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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