Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15k07
         (341 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical ...    87   4e-18
Z66524-1|CAA91420.2|  500|Caenorhabditis elegans Hypothetical pr...    30   0.38 
Z81555-1|CAB04516.1|  242|Caenorhabditis elegans Hypothetical pr...    29   1.2  
AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical ...    27   4.7  
AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical ...    27   4.7  
Z81494-11|CAN99681.1|  455|Caenorhabditis elegans Hypothetical p...    26   8.1  
Z81494-7|CAI79161.1|  387|Caenorhabditis elegans Hypothetical pr...    26   8.1  
Z81494-6|CAC42275.1|  451|Caenorhabditis elegans Hypothetical pr...    26   8.1  
AL032639-10|CAA21634.1|  108|Caenorhabditis elegans Hypothetical...    26   8.1  

>AL110490-2|CAB54440.1|   91|Caenorhabditis elegans Hypothetical
           protein Y48B6A.2 protein.
          Length = 91

 Score = 86.6 bits (205), Expect = 4e-18
 Identities = 37/43 (86%), Positives = 40/43 (93%)
 Frame = +1

Query: 37  MAKRTKKVGITGKYGTRYGASLRKMVKKMEVTQHAKYTCSFCG 165
           MAKRTKKVGI GKYGTRYGASLRKM KK+EV QH++YTCSFCG
Sbjct: 1   MAKRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCG 43



 Score = 62.5 bits (145), Expect = 8e-11
 Identities = 24/46 (52%), Positives = 35/46 (76%)
 Frame = +2

Query: 164 DAMKRSCVGIWSCKRCKRTVAGGAWVFSTTAASSCRSAVRRLREVK 301
           +AMKR   GIW+C +C + VAGGA+V+ T  A++ RS +RRLR++K
Sbjct: 45  EAMKRKATGIWNCAKCHKVVAGGAYVYGTVTAATVRSTIRRLRDLK 90


>Z66524-1|CAA91420.2|  500|Caenorhabditis elegans Hypothetical
           protein T13H5.4 protein.
          Length = 500

 Score = 30.3 bits (65), Expect = 0.38
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 15  CIGEVYQNGQTYQKGWNYWQIWHTLRCLST*NGQKDGSNPTRKVYLLILW 164
           C  + Y+  + +QK +N W+  H +RCL   N     +N T+    L LW
Sbjct: 410 CGNQTYKGPKAFQKHFNEWRHSHGMRCLGIPN-TSHFANITKIKDALDLW 458


>Z81555-1|CAB04516.1|  242|Caenorhabditis elegans Hypothetical
           protein F58E10.5 protein.
          Length = 242

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 103 RKMVKKMEVTQHAKYTCSFCGCYETFLCR 189
           +  +KK+  T H   +CS CGC ET L R
Sbjct: 164 KNKIKKIS-TMHINSSCSNCGCRETKLWR 191


>AF039048-9|AAB94233.1|  362|Caenorhabditis elegans Hypothetical
           protein F16B4.2a protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 173 KRSCVGIWSCKRCKRTVAGGAWVFSTT 253
           K  C+  W+C  C +T+   +W F +T
Sbjct: 333 KEKCILDWTCSTCDKTIE--SWYFRST 357


>AF039048-8|AAT68896.1|  367|Caenorhabditis elegans Hypothetical
           protein F16B4.2b protein.
          Length = 367

 Score = 26.6 bits (56), Expect = 4.7
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 173 KRSCVGIWSCKRCKRTVAGGAWVFSTT 253
           K  C+  W+C  C +T+   +W F +T
Sbjct: 338 KEKCILDWTCSTCDKTIE--SWYFRST 362


>Z81494-11|CAN99681.1|  455|Caenorhabditis elegans Hypothetical
           protein F02E9.10c protein.
          Length = 455

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 143 SILAHFVDAMKRSCVGIWSCKRC 211
           +I+A +  A  RS VGIWS + C
Sbjct: 14  TIVAKYEKAHNRSVVGIWSFRFC 36


>Z81494-7|CAI79161.1|  387|Caenorhabditis elegans Hypothetical
           protein F02E9.10b protein.
          Length = 387

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 143 SILAHFVDAMKRSCVGIWSCKRC 211
           +I+A +  A  RS VGIWS + C
Sbjct: 14  TIVAKYEKAHNRSVVGIWSFRFC 36


>Z81494-6|CAC42275.1|  451|Caenorhabditis elegans Hypothetical
           protein F02E9.10a protein.
          Length = 451

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 143 SILAHFVDAMKRSCVGIWSCKRC 211
           +I+A +  A  RS VGIWS + C
Sbjct: 14  TIVAKYEKAHNRSVVGIWSFRFC 36


>AL032639-10|CAA21634.1|  108|Caenorhabditis elegans Hypothetical
           protein Y38F1A.9 protein.
          Length = 108

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 79  GTRYGASLRKMVKKMEVTQHAK 144
           G RY + ++KMV K  VT H K
Sbjct: 46  GDRYVSKIKKMVGKFTVTLHIK 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,139,733
Number of Sequences: 27780
Number of extensions: 166872
Number of successful extensions: 497
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 440341558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)