Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15k07
         (341 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   0.44 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   1.8  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   1.8  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   1.8  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   3.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   5.4  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    21   5.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.4  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        20   7.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   7.2  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    20   9.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   9.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   9.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   9.5  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    20   9.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   9.5  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.2 bits (50), Expect = 0.44
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 119 FLTILRREAP*RVPYLPVIP 60
           FL ++    P  VPY PVIP
Sbjct: 639 FLVVISSSNPLNVPYGPVIP 658


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 39  GQTYQKGWNYWQIWHTL 89
           G+     W+Y+ I+HTL
Sbjct: 165 GKNITTPWDYYYIYHTL 181


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 39  GQTYQKGWNYWQIWHTL 89
           G+     W+Y+ I+HTL
Sbjct: 180 GKNITTPWDYYYIYHTL 196


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 39  GQTYQKGWNYWQIWHTL 89
           G+     W+Y+ I+HTL
Sbjct: 68  GKNITTPWDYYYIYHTL 84


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 86  RVPYLPVIPTFLV 48
           R+P LP+IP + V
Sbjct: 784 RIPILPMIPVYCV 796


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +2

Query: 26  GLPKWPNVPKRLELLANMAHVTVPL 100
           G+P  PN+P  +  +  M  +  P+
Sbjct: 428 GMPPLPNMPGSMPTMPTMPSMAGPI 452


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -3

Query: 216 LLHRLQDQMPTQERFIASTK 157
           L H L   MPT +  ++S K
Sbjct: 10  LPHHLSPNMPTMDSTVSSAK 29


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 114 DHFT*RGTVTCAIFASNSNLFGTFGHFGK 28
           D+F     V  A+FA  S+ +  F  FG+
Sbjct: 596 DNFGPLSNVRFAVFALGSSAYPNFCAFGR 624


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 6   VNFCIGEVYQNGQT 47
           VN+ +G  +QNG T
Sbjct: 167 VNYTLGHHHQNGAT 180


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -2

Query: 208 SLTRPDADTRTFHSIHK 158
           + TRP   T TFH I K
Sbjct: 334 TFTRPCGITLTFHEILK 350


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 138 RKVYLLILWML*NVLVSASGLVS 206
           +K   LI W +  V+ + +G+VS
Sbjct: 208 KKTPFLISWGIAQVVTTVAGIVS 230


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = +1

Query: 136 HAKYTCSFCG 165
           H +YTC  CG
Sbjct: 480 HDEYTCMDCG 489


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/9 (55%), Positives = 5/9 (55%)
 Frame = +3

Query: 54  KGWNYWQIW 80
           K WN W  W
Sbjct: 694 KSWNKWNDW 702


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/9 (55%), Positives = 5/9 (55%)
 Frame = +3

Query: 54  KGWNYWQIW 80
           K WN W  W
Sbjct: 694 KSWNKWNDW 702


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 138 RKVYLLILWML*NVLVSASGLVS 206
           +K   LI W +  V+ + +G+VS
Sbjct: 208 KKTPFLISWGIAQVVTTVAGIVS 230


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 5/9 (55%), Positives = 5/9 (55%)
 Frame = +3

Query: 54  KGWNYWQIW 80
           K WN W  W
Sbjct: 694 KSWNKWNDW 702


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,296
Number of Sequences: 438
Number of extensions: 2339
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7839909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)