Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15j10
         (537 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067219-11|AAC17032.1|  227|Caenorhabditis elegans Hypothetical...   116   1e-26
Z35641-4|CAA84708.1|  497|Caenorhabditis elegans Hypothetical pr...   104   5e-23
Z29443-13|CAA82579.1|  497|Caenorhabditis elegans Hypothetical p...   104   5e-23
Z92796-2|CAB07231.1|  347|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z81117-9|CAB03317.2|  333|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z70780-8|CAA94825.2|  266|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81562-2|CAB04559.1|  331|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AF067219-11|AAC17032.1|  227|Caenorhabditis elegans Hypothetical
           protein R12E2.11 protein.
          Length = 227

 Score =  116 bits (279), Expect = 1e-26
 Identities = 56/131 (42%), Positives = 86/131 (65%), Gaps = 1/131 (0%)
 Frame = +2

Query: 110 DLALKLFSIDAVKFGDFTTKTGIKTPAYFDLRVIVSYPDIMELTSNMLYDLAVKDS-QFD 286
           D    L+ ++  + G+F  K+G  TP Y DLR I+S P ++ + +  + +  V  + +FD
Sbjct: 32  DFFENLYQMECFRTGEFYLKSGQMTPIYIDLRRIMSSPRVLRMAAQAMCEKIVASNLKFD 91

Query: 287 HLCGVPYTALPIATLLSIQAKKPMLMRRKETKSYGTKKSIEGHFKKDDTCLIIEDVITSG 466
           ++ GVPY ALP+ATL+S     PMLM+RKE K+YGTK+ IEG ++   T L++EDV+TSG
Sbjct: 92  YVVGVPYAALPLATLVSDILNVPMLMKRKEAKAYGTKQLIEGVYQPGGTVLLVEDVVTSG 151

Query: 467 SSILETVKDLK 499
            SI ET + ++
Sbjct: 152 ESIRETAEAIR 162


>Z35641-4|CAA84708.1|  497|Caenorhabditis elegans Hypothetical
           protein T07C4.1 protein.
          Length = 497

 Score =  104 bits (249), Expect = 5e-23
 Identities = 53/131 (40%), Positives = 82/131 (62%), Gaps = 2/131 (1%)
 Frame = +2

Query: 110 DLALKLFSIDAVKFGDFTTKTGIKTPAYFDLRVIVSYPDIMELTSNMLY-DLAVKDSQFD 286
           +L  ++      KFG+F  K+G  +P Y DLR    +P ++ L S  +   + + + Q+ 
Sbjct: 16  NLLRQMLKASVFKFGEFQLKSGQISPIYIDLRECFGHPGLLMLISEAISKQVEISEVQYA 75

Query: 287 HLCGVPYTALPIATLLSIQ-AKKPMLMRRKETKSYGTKKSIEGHFKKDDTCLIIEDVITS 463
            + G+PY ALP A++ +    KKP+L+ RKE KSYGTKK IEG ++ +D  ++IEDV+T+
Sbjct: 76  GVLGIPYAALPYASVAAGNYLKKPLLIVRKEAKSYGTKKLIEGLYQPNDRLILIEDVVTT 135

Query: 464 GSSILETVKDL 496
           G SIL+ VK L
Sbjct: 136 GGSILDVVKVL 146


>Z29443-13|CAA82579.1|  497|Caenorhabditis elegans Hypothetical
           protein T07C4.1 protein.
          Length = 497

 Score =  104 bits (249), Expect = 5e-23
 Identities = 53/131 (40%), Positives = 82/131 (62%), Gaps = 2/131 (1%)
 Frame = +2

Query: 110 DLALKLFSIDAVKFGDFTTKTGIKTPAYFDLRVIVSYPDIMELTSNMLY-DLAVKDSQFD 286
           +L  ++      KFG+F  K+G  +P Y DLR    +P ++ L S  +   + + + Q+ 
Sbjct: 16  NLLRQMLKASVFKFGEFQLKSGQISPIYIDLRECFGHPGLLMLISEAISKQVEISEVQYA 75

Query: 287 HLCGVPYTALPIATLLSIQ-AKKPMLMRRKETKSYGTKKSIEGHFKKDDTCLIIEDVITS 463
            + G+PY ALP A++ +    KKP+L+ RKE KSYGTKK IEG ++ +D  ++IEDV+T+
Sbjct: 76  GVLGIPYAALPYASVAAGNYLKKPLLIVRKEAKSYGTKKLIEGLYQPNDRLILIEDVVTT 135

Query: 464 GSSILETVKDL 496
           G SIL+ VK L
Sbjct: 136 GGSILDVVKVL 146


>Z92796-2|CAB07231.1|  347|Caenorhabditis elegans Hypothetical
           protein H25K10.3 protein.
          Length = 347

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 289 FVWSSIYCLAHCYTTKYTSEKTYVDEKERNKILWNQKK 402
           F W+S+ C A C +   T+  + +    R+  LWN K+
Sbjct: 112 FAWTSVICQAMCVSVLATNRLSAILFPHRHFQLWNSKR 149


>AL022270-1|CAB63432.1| 1270|Caenorhabditis elegans Hypothetical
           protein C26G2.1 protein.
          Length = 1270

 Score = 29.1 bits (62), Expect = 2.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 162 VKSPNFTASIENSFKARSSSLSKPIVTATGN 70
           V S N T  +   + AR +S+S P++ ATG+
Sbjct: 767 VGSTNITIKLAVEYSARITSISTPVIAATGD 797


>Z81117-9|CAB03317.2|  333|Caenorhabditis elegans Hypothetical
           protein T06E6.8 protein.
          Length = 333

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = -1

Query: 405 MLFLVP*DFVSFLLINIGFFACILSSVAMGKAVYGTPH--K*SNWLSFTAKSYNI-FEVS 235
           M+F+   DF  + L ++G  AC L  + +   ++ TP   K   W+ F A  ++I F++S
Sbjct: 1   MIFMESPDFFFYTLHSMGAVACPLQILGLYCILFKTPQSMKSVKWVLFNAHIWSILFDIS 60


>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical
           protein F12F6.5 protein.
          Length = 1059

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +1

Query: 16  HVFLLWFFFRFLISLCEF 69
           HV LL F F FL  LCEF
Sbjct: 648 HVLLLRFLFAFLSHLCEF 665


>Z70780-8|CAA94825.2|  266|Caenorhabditis elegans Hypothetical
           protein F46B6.9 protein.
          Length = 266

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 292 VWSSIYCLAHCYTTKYTSEKTYVDEKER 375
           +W+ + CLAH  T K  ++  Y  E+ER
Sbjct: 153 IWTIVQCLAHSDTKKLRADFMYWIEEER 180


>Z81562-2|CAB04559.1|  331|Caenorhabditis elegans Hypothetical
           protein K03D7.4 protein.
          Length = 331

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
 Frame = -1

Query: 384 DFVSFLLINIGFFACILSSVAMGKAVYGTPHK*SN--WLSFTAKSYN-IFEVS 235
           DF+ + L  +G   C L  + +   +Y TPH  S+  W+ F A  ++ IF+++
Sbjct: 5   DFLFYTLHAMGAVTCPLQILGIYCILYKTPHAMSSAKWVLFNAHIWSLIFDIT 57


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,039,095
Number of Sequences: 27780
Number of extensions: 247233
Number of successful extensions: 700
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)