Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15i24
(456 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S... 253 2e-67
CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein. 253 2e-67
BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23 p... 253 2e-67
AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23 p... 107 2e-23
Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal p... 54 2e-07
CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein. 54 2e-07
BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal... 54 2e-07
BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal... 54 2e-07
BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal... 54 2e-07
AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12 p... 54 2e-07
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 32 0.81
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 32 0.81
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 32 0.81
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 32 0.81
AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein. 32 1.1
AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein. 32 1.1
AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein. 32 1.1
AB088477-1|BAC06326.2| 1332|Homo sapiens KIAA0482 protein protein. 30 4.3
AL442071-1|CAH73668.1| 5430|Homo sapiens microtubule-actin cross... 29 7.6
AL365277-7|CAI16417.1| 5430|Homo sapiens microtubule-actin cross... 29 7.6
AL355477-1|CAH70156.1| 5430|Homo sapiens microtubule-actin cross... 29 7.6
AL137853-1|CAI21814.1| 5430|Homo sapiens microtubule-actin cross... 29 7.6
AK127519-1|BAC87016.1| 1062|Homo sapiens protein ( Homo sapiens ... 29 7.6
AF325341-1|AAL39000.1| 4631|Homo sapiens macrophin 1 isoform 2 p... 29 7.6
AF141968-1|AAF06360.1| 5373|Homo sapiens trabeculin-alpha protein. 29 7.6
AB029290-1|BAA83821.1| 5430|Homo sapiens actin binding protein A... 29 7.6
AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein. 29 10.0
>D14530-1|BAA03400.1| 143|Homo sapiens yeast ribosomal protein S28
homologue protein.
Length = 143
Score = 253 bits (620), Expect = 2e-67
Identities = 119/135 (88%), Positives = 127/135 (94%)
Frame = +1
Query: 49 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 228
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 229 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 408
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 409 KVVKVANVSLLALYK 453
KVVKVANVSLLALYK
Sbjct: 121 KVVKVANVSLLALYK 135
>CR456996-1|CAG33277.1| 143|Homo sapiens RPS23 protein.
Length = 143
Score = 253 bits (620), Expect = 2e-67
Identities = 119/135 (88%), Positives = 127/135 (94%)
Frame = +1
Query: 49 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 228
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 229 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 408
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 409 KVVKVANVSLLALYK 453
KVVKVANVSLLALYK
Sbjct: 121 KVVKVANVSLLALYK 135
>BC070221-1|AAH70221.1| 143|Homo sapiens ribosomal protein S23
protein.
Length = 143
Score = 253 bits (620), Expect = 2e-67
Identities = 119/135 (88%), Positives = 127/135 (94%)
Frame = +1
Query: 49 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 228
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 229 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRF 408
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 409 KVVKVANVSLLALYK 453
KVVKVANVSLLALYK
Sbjct: 121 KVVKVANVSLLALYK 135
>AB007158-1|BAA25822.1| 59|Homo sapiens ribosomal protein S23
protein.
Length = 59
Score = 107 bits (256), Expect = 2e-23
Identities = 50/52 (96%), Positives = 50/52 (96%)
Frame = +1
Query: 298 FVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK 453
FVP DGCLN IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK
Sbjct: 1 FVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK 52
>Y11681-2|CAA72377.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 precursor protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 157 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 336
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 337 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 420
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>CR407609-1|CAG28537.1| 138|Homo sapiens MRPS12 protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 157 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 336
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 337 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 420
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>BC007499-1|AAH07499.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 157 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 336
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 337 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 420
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>BC006424-1|AAH06424.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 157 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 336
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 337 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 420
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>BC001617-1|AAH01617.1| 138|Homo sapiens mitochondrial ribosomal
protein S12 protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 157 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 336
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 337 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 420
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>AF058761-1|AAC64704.1| 138|Homo sapiens ribosomal protein S12
protein.
Length = 138
Score = 54.0 bits (124), Expect = 2e-07
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = +1
Query: 157 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEE 336
K P G KG+VL + K+PNSA RKC RV+L G++ F+P +G + ++E
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQE 104
Query: 337 NDEVLVAGFGRKGHAVGDIPGVRFKVVK 420
+ VLV G GR D+PGV+ VV+
Sbjct: 105 HQIVLVEG-GR----TQDLPGVKLTVVR 127
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 32.3 bits (70), Expect = 0.81
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -2
Query: 416 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 243
+TL+ TP P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 531 STLQTTPST-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 585
Query: 242 AELGCLASTPTFSRTM 195
+ + TP FS T+
Sbjct: 586 SSPSSASITPVFSTTI 601
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 32.3 bits (70), Expect = 0.81
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -2
Query: 416 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 243
+TL+ TP P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 531 STLQTTPST-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 585
Query: 242 AELGCLASTPTFSRTM 195
+ + TP FS T+
Sbjct: 586 SSPSSASITPVFSTTI 601
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 32.3 bits (70), Expect = 0.81
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -2
Query: 416 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 243
+TL+ TP P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 191 STLQTTPST-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 245
Query: 242 AELGCLASTPTFSRTM 195
+ + TP FS T+
Sbjct: 246 SSPSSASITPVFSTTI 261
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 32.3 bits (70), Expect = 0.81
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -2
Query: 416 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 243
+TL+ TP P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 191 STLQTTPST-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 245
Query: 242 AELGCLASTPTFSRTM 195
+ + TP FS T+
Sbjct: 246 SSPSSASITPVFSTTI 261
>AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein.
Length = 901
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -2
Query: 416 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 243
+TL+ TP + P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 215 STLQTTPSI-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 269
Query: 242 AELGCLASTPTFSRTM 195
+ + TP F+ T+
Sbjct: 270 SSPSSASITPVFATTI 285
>AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -2
Query: 416 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 243
+TL+ TP + P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 192 STLQTTPSI-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 246
Query: 242 AELGCLASTPTFSRTM 195
+ + TP F+ T+
Sbjct: 247 SSPSSASITPVFATTI 262
>AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 31.9 bits (69), Expect = 1.1
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -2
Query: 416 TTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAV--TFFPFLMSCTRTHLRM 243
+TL+ TP + P TSTS F++ F + S TNA+ +F + S T T +
Sbjct: 192 STLQTTPSI-----PSLQTSLTSTSEFTTESFTRGSTSTNAILTSFSTIIWSSTPTIIMS 246
Query: 242 AELGCLASTPTFSRTM 195
+ + TP F+ T+
Sbjct: 247 SSPSSASITPVFATTI 262
>AB088477-1|BAC06326.2| 1332|Homo sapiens KIAA0482 protein protein.
Length = 1332
Score = 29.9 bits (64), Expect = 4.3
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +3
Query: 135 SPHGYEMEG*PFRWCISRKGHRPRESWCRS*AAQLCHPQMRPC 263
SPHG +M G P RP ES+C PQ RPC
Sbjct: 37 SPHGPDMSG-PLEGADGGGDPRPGESFCPGGVPSPGPPQHRPC 78
>AL442071-1|CAH73668.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 419 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 312
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 532 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 568
>AL365277-7|CAI16417.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 419 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 312
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 532 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 568
>AL355477-1|CAH70156.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 419 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 312
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 532 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 568
>AL137853-1|CAI21814.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 419 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 312
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 532 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 568
>AK127519-1|BAC87016.1| 1062|Homo sapiens protein ( Homo sapiens
cDNA FLJ45612 fis, clone BRTHA3025073, highly similar
to Actin cross-linking family protein 7. ).
Length = 1062
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 419 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 312
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 692 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 728
>AF325341-1|AAL39000.1| 4631|Homo sapiens macrophin 1 isoform 2
protein.
Length = 4631
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 419 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 312
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 351 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 387
>AF141968-1|AAF06360.1| 5373|Homo sapiens trabeculin-alpha protein.
Length = 5373
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 419 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 312
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 497 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 533
>AB029290-1|BAA83821.1| 5430|Homo sapiens actin binding protein
ABP620 protein.
Length = 5430
Score = 29.1 bits (62), Expect = 7.6
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 419 FTTLKRTPGMSPTA*PLRPNPAT-STSSFSSMWFRQP 312
FT+L+ P + T L+ P T +T S S+ WFR+P
Sbjct: 532 FTSLELVPPSTLTTTHLKAEPLTKATHSSSTSWFRKP 568
>AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein.
Length = 727
Score = 28.7 bits (61), Expect = 10.0
Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 1/105 (0%)
Frame = +1
Query: 58 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLE-KVGVEAKQP 234
P I R H N A++E KA +H L+ K V KQ
Sbjct: 421 PFYITHIRAHTNLPGPLTKANEEADLLVSSALIKAQELHALTHVNAAGLKNKFDVTWKQA 480
Query: 235 NSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGR 369
++ C + Q++ + PR C N + + D V FGR
Sbjct: 481 KDIVQHCTQCQVLHLPTQEAGVNPRGLCPNALWQMDVTHVPSFGR 525
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,577,382
Number of Sequences: 237096
Number of extensions: 1695125
Number of successful extensions: 3987
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3987
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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