Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15i15
(574 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 235 8e-62
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 235 8e-62
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 235 8e-62
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 235 8e-62
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 235 8e-62
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 235 8e-62
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 190 4e-48
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 149 9e-36
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 85 2e-16
BC015769-1|AAH15769.1| 686|Homo sapiens FLJ21963 protein protein. 29 8.8
BC009317-1|AAH09317.1| 686|Homo sapiens FLJ21963 protein protein. 29 8.8
AK025616-1|BAB15190.1| 686|Homo sapiens protein ( Homo sapiens ... 29 8.8
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 235 bits (575), Expect = 8e-62
Identities = 112/171 (65%), Positives = 128/171 (74%), Gaps = 3/171 (1%)
Frame = +3
Query: 63 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 242
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 243 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 422
IV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 423 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV---HHYKRLNTXR 566
AHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV H R T R
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKR 171
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 235 bits (575), Expect = 8e-62
Identities = 112/171 (65%), Positives = 128/171 (74%), Gaps = 3/171 (1%)
Frame = +3
Query: 63 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 242
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 243 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 422
IV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 423 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV---HHYKRLNTXR 566
AHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV H R T R
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKR 171
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 235 bits (575), Expect = 8e-62
Identities = 112/171 (65%), Positives = 128/171 (74%), Gaps = 3/171 (1%)
Frame = +3
Query: 63 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 242
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 243 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 422
IV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 423 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV---HHYKRLNTXR 566
AHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV H R T R
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKR 171
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 235 bits (575), Expect = 8e-62
Identities = 112/171 (65%), Positives = 128/171 (74%), Gaps = 3/171 (1%)
Frame = +3
Query: 63 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 242
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 243 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 422
IV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 423 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV---HHYKRLNTXR 566
AHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV H R T R
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKR 171
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 235 bits (575), Expect = 8e-62
Identities = 112/171 (65%), Positives = 128/171 (74%), Gaps = 3/171 (1%)
Frame = +3
Query: 63 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 242
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 243 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 422
IV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTAAGAVTQCYRDMGARHRAR 120
Query: 423 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV---HHYKRLNTXR 566
AHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV H R T R
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKR 171
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 235 bits (575), Expect = 8e-62
Identities = 112/171 (65%), Positives = 128/171 (74%), Gaps = 3/171 (1%)
Frame = +3
Query: 63 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 242
MKA G LREY+V+GR LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 243 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 422
IV NFGIWLRY+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 IVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 423 AHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV---HHYKRLNTXR 566
AHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV H R T R
Sbjct: 121 AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKR 171
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 190 bits (462), Expect = 4e-48
Identities = 88/135 (65%), Positives = 103/135 (76%)
Frame = +3
Query: 63 MKAKGQLREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGE 242
MKA G LREY+V+GR+LP+ PPLY+MRIF+P+ +VAKSRFWYF+ QLKK KK++GE
Sbjct: 1 MKASGTLREYKVVGRRLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE 60
Query: 243 IVXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRAR 422
V NFGIWLR +SRSG HNMYREYRDL+ GAVTQCYRDMGARHRAR
Sbjct: 61 TVYCGQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRAR 120
Query: 423 AHSIQIIKVEVIKAA 467
AHSIQI+ VE I A+
Sbjct: 121 AHSIQIMMVEEIAAS 135
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 149 bits (360), Expect = 9e-36
Identities = 69/95 (72%), Positives = 75/95 (78%), Gaps = 3/95 (3%)
Frame = +3
Query: 291 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKAAA 470
NFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYRDMGARHRARAHSIQI+KVE I +
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 471 CRRPQVKQFHNSTIRFPLPKRV---HHYKRLNTXR 566
CRRP VKQFH+S I+FPLP RV H R T R
Sbjct: 101 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKR 135
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 85.0 bits (201), Expect = 2e-16
Identities = 42/61 (68%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Frame = +3
Query: 393 RDMGARHRARAHSIQIIKVEVIKAAACRRPQVKQFHNSTIRFPLPKRV---HHYKRLNTX 563
RDMGARHRARAHSIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV H R T
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 564 R 566
R
Sbjct: 61 R 61
>BC015769-1|AAH15769.1| 686|Homo sapiens FLJ21963 protein protein.
Length = 686
Score = 29.5 bits (63), Expect = 8.8
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 208 LRKYQKRDLATIGSGEKILILYKGGLGSFSEGSLRPITSYS--LNCPLAFIFGVFI*KTW 35
+ K Q D + S + ILY G +G +RP Y+ L+ ++ I+G+ + W
Sbjct: 277 MAKAQSHDCVPVLSEHPLYILYTSGTTGLPKGVIRPTGGYAVMLHWSMSSIYGLQPGEVW 336
Query: 34 SAETE 20
A ++
Sbjct: 337 WAASD 341
>BC009317-1|AAH09317.1| 686|Homo sapiens FLJ21963 protein protein.
Length = 686
Score = 29.5 bits (63), Expect = 8.8
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 208 LRKYQKRDLATIGSGEKILILYKGGLGSFSEGSLRPITSYS--LNCPLAFIFGVFI*KTW 35
+ K Q D + S + ILY G +G +RP Y+ L+ ++ I+G+ + W
Sbjct: 277 MAKAQSHDCVPVLSEHPLYILYTSGTTGLPKGVIRPTGGYAVMLHWSMSSIYGLQPGEVW 336
Query: 34 SAETE 20
A ++
Sbjct: 337 WAASD 341
>AK025616-1|BAB15190.1| 686|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21963 fis, clone HEP05583. ).
Length = 686
Score = 29.5 bits (63), Expect = 8.8
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 208 LRKYQKRDLATIGSGEKILILYKGGLGSFSEGSLRPITSYS--LNCPLAFIFGVFI*KTW 35
+ K Q D + S + ILY G +G +RP Y+ L+ ++ I+G+ + W
Sbjct: 277 MAKAQSHDCVPVLSEHPLYILYTSGTTGLPKGVIRPTGGYAVMLHWSMSSIYGLQPGEVW 336
Query: 34 SAETE 20
A ++
Sbjct: 337 WAASD 341
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,717,757
Number of Sequences: 237096
Number of extensions: 1706571
Number of successful extensions: 4004
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4004
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -