Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15h17
(174 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein. 41 8e-04
M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein. 41 8e-04
BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17 p... 41 8e-04
BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17 p... 41 8e-04
BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17 p... 41 8e-04
BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17 p... 41 8e-04
BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17 p... 41 8e-04
BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17 p... 41 8e-04
BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17 p... 41 8e-04
AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory compon... 41 8e-04
AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA seq... 32 0.38
DQ315369-1|ABC41928.1| 642|Homo sapiens G protein-coupled recep... 27 8.2
AY140953-1|AAN46667.1| 708|Homo sapiens G-protein coupled recep... 27 8.2
AL356421-1|CAI15578.1| 708|Homo sapiens G protein-coupled recep... 27 8.2
AK126683-1|BAC86641.1| 214|Homo sapiens protein ( Homo sapiens ... 27 8.2
AB083617-1|BAB89330.1| 416|Homo sapiens putative G-protein coup... 27 8.2
AB065684-1|BAC05907.1| 638|Homo sapiens seven transmembrane hel... 27 8.2
>M18000-1|AAA60285.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 104 IEKYYTRLTLDFDTNKRICEE 166
IEKYYTRL DF TNKR+CEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEE 37
>M13932-1|AAA60284.1| 135|Homo sapiens RPS17 protein.
Length = 135
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 104 IEKYYTRLTLDFDTNKRICEE 166
IEKYYTRL DF TNKR+CEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEE 37
>BC071928-1|AAH71928.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 104 IEKYYTRLTLDFDTNKRICEE 166
IEKYYTRL DF TNKR+CEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEE 37
>BC070222-1|AAH70222.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 104 IEKYYTRLTLDFDTNKRICEE 166
IEKYYTRL DF TNKR+CEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEE 37
>BC062715-1|AAH62715.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 104 IEKYYTRLTLDFDTNKRICEE 166
IEKYYTRL DF TNKR+CEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEE 37
>BC049824-1|AAH49824.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 104 IEKYYTRLTLDFDTNKRICEE 166
IEKYYTRL DF TNKR+CEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEE 37
>BC022370-1|AAH22370.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 104 IEKYYTRLTLDFDTNKRICEE 166
IEKYYTRL DF TNKR+CEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEE 37
>BC019899-1|AAH19899.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 104 IEKYYTRLTLDFDTNKRICEE 166
IEKYYTRL DF TNKR+CEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEE 37
>BC009407-1|AAH09407.1| 135|Homo sapiens ribosomal protein S17
protein.
Length = 135
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 104 IEKYYTRLTLDFDTNKRICEE 166
IEKYYTRL DF TNKR+CEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEE 37
>AK026570-1|BAB15501.1| 135|Homo sapiens atory regulatory component
Gs of adenylyl protein.
Length = 135
Score = 40.7 bits (91), Expect = 8e-04
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +2
Query: 104 IEKYYTRLTLDFDTNKRICEE 166
IEKYYTRL DF TNKR+CEE
Sbjct: 17 IEKYYTRLGNDFHTNKRVCEE 37
>AL049693-2|CAB89564.1| 135|Homo sapiens protein ( Human DNA
sequence from clone RP4-753D5 on chromosome 6p12.1-12.3
Contains the 3' end of the TFAP2B gene for transcription
factor AP-2 sium/caltranscription factor AP-2 beta
(activating enhancer binding protein 2 beta)).
Length = 135
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +2
Query: 104 IEKYYTRLTLDFDTNKRICEE 166
IEKYY L DF TNK +C+E
Sbjct: 17 IEKYYMHLGNDFHTNKHMCKE 37
>DQ315369-1|ABC41928.1| 642|Homo sapiens G protein-coupled receptor
111 protein.
Length = 642
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 173 FFFLHIFFYLYQNQVLILYSI 111
FF+L +FF++ +LILY I
Sbjct: 459 FFYLSVFFWMLAKALLILYGI 479
>AY140953-1|AAN46667.1| 708|Homo sapiens G-protein coupled receptor
GPR111 protein.
Length = 708
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 173 FFFLHIFFYLYQNQVLILYSI 111
FF+L +FF++ +LILY I
Sbjct: 527 FFYLSVFFWMLAKALLILYGI 547
>AL356421-1|CAI15578.1| 708|Homo sapiens G protein-coupled receptor
111 protein.
Length = 708
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 173 FFFLHIFFYLYQNQVLILYSI 111
FF+L +FF++ +LILY I
Sbjct: 527 FFYLSVFFWMLAKALLILYGI 547
>AK126683-1|BAC86641.1| 214|Homo sapiens protein ( Homo sapiens
cDNA FLJ44729 fis, clone BRACE3024879. ).
Length = 214
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 173 FFFLHIFFYLYQNQVLILYSI 111
FF+L +FF++ +LILY I
Sbjct: 31 FFYLSVFFWMLAKALLILYGI 51
>AB083617-1|BAB89330.1| 416|Homo sapiens putative G-protein coupled
receptor protein.
Length = 416
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 173 FFFLHIFFYLYQNQVLILYSI 111
FF+L +FF++ +LILY I
Sbjct: 235 FFYLSVFFWMLAKALLILYGI 255
>AB065684-1|BAC05907.1| 638|Homo sapiens seven transmembrane helix
receptor protein.
Length = 638
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 173 FFFLHIFFYLYQNQVLILYSI 111
FF+L +FF++ +LILY I
Sbjct: 457 FFYLSVFFWMLAKALLILYGI 477
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,511,562
Number of Sequences: 237096
Number of extensions: 227083
Number of successful extensions: 338
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 76,859,062
effective HSP length: 37
effective length of database: 68,086,510
effective search space used: 1361730200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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