Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15h17
         (174 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          19   7.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    19   7.3  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   7.3  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 22  ILSKAALYNFSHGSCPD*NRQESGEDYY 105
           ++ KA  YN + G   D  +  +  DYY
Sbjct: 173 VMQKA--YNIAMGDTADMKKTYNNIDYY 198


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = +1

Query: 4   SFRFSLILSKAALYNFSHGSCPD*NRQESGEDY 102
           +F  +++ S   L+N +  S  +  R+E+G+++
Sbjct: 144 TFHLNVLKSFIDLFNANARSVVEKMRKENGKEF 176


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +1

Query: 22  ILSKAALYNFSHGSCPD*NRQESGEDYY 105
           ++ KA  YN + G   D  +  +  DYY
Sbjct: 173 VMQKA--YNIAMGDTADMKKTYNNIDYY 198


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,532
Number of Sequences: 438
Number of extensions: 365
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 37
effective length of database: 130,137
effective search space used:  2602740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)