Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15h07
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 31 0.56
Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical pr... 31 0.74
U23177-4|AAM22055.1| 374|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z81091-4|CAD56588.1| 287|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 29 2.3
Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical pr... 29 3.0
L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome cond... 29 3.0
AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of... 28 4.0
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical p... 28 5.2
Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical p... 28 5.2
Z46828-3|CAA86858.2| 363|Caenorhabditis elegans Hypothetical pr... 27 6.9
AC024776-20|AAK68473.2| 460|Caenorhabditis elegans Nuclear horm... 27 6.9
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 27 9.1
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 27 9.1
AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-relat... 27 9.1
AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase prote... 27 9.1
AC006674-8|AAF39938.2| 131|Caenorhabditis elegans Hypothetical ... 27 9.1
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 9.1
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 9.1
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical
protein F31E3.4 protein.
Length = 1131
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 161 PQTMLLIVPTPIFPRHLAIRFQVPARRGTCTKVQNRTRTWN 283
PQ M I + ++ + I QVPARRG T TWN
Sbjct: 444 PQEMKRIKVSKLYKKRPLIVNQVPARRGNSQDETQETYTWN 484
>Z46242-7|CAA86336.1| 1549|Caenorhabditis elegans Hypothetical protein
F35G12.8 protein.
Length = 1549
Score = 30.7 bits (66), Expect = 0.74
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 10 ECYVKIDRLFKESIKKIMDDT-EAFEKEQEAERLRAEQTAANALLNRRAQTSADDVVNRA 186
E K+D +FKE ++ D+ E+ +K Q+ E+ A++T AN + R D+ ++R
Sbjct: 899 EIQSKLDGIFKELVQCHRDEAKESLQKRQKLEKDIAKET-ANISNSGRNIAKCDENISRH 957
Query: 187 DANI 198
D +I
Sbjct: 958 DKDI 961
>U23177-4|AAM22055.1| 374|Caenorhabditis elegans Hypothetical
protein C56G2.7 protein.
Length = 374
Score = 29.5 bits (63), Expect = 1.7
Identities = 22/70 (31%), Positives = 31/70 (44%)
Frame = +1
Query: 211 SDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTADEYNSLVRTVLLRL 390
SD LP SS PR SSE+D EP+ + AE + N +N+L R+ +
Sbjct: 187 SDTLPISSVPRGEDASSEAD--CEPSTNAAEEGSSNPLSLNNPAIQQIFNNLGRSQKKEV 244
Query: 391 IEKALATLTN 420
L+N
Sbjct: 245 AVSLATALSN 254
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +1
Query: 43 ESIKKIMDDTEAFEKEQE--AERLRAEQTAANALLNRRAQTSADDVVNRADANISTAFS 213
E +K++ + F+++ + +ER + +TAANA+L RR A DVV + +A + TA++
Sbjct: 1805 EHLKELQSKFDEFKQKVKNGSERFTSCETAANAIL-RRNPPFARDVVKKQEA-LRTAWN 1861
>Z81091-4|CAD56588.1| 287|Caenorhabditis elegans Hypothetical
protein F55H12.5 protein.
Length = 287
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 346 ADEYNSLVRTVLLRLIEKALATLTNRLHITTIDQLKKFRDYLNSDADAGEFQ 501
AD + R LL + +T + R TT+ KKF D++NS ++ F+
Sbjct: 2 ADTVQTNGRASLLAAVNNRASTRSTRKKKTTMLSPKKFCDFINSKTNSKSFE 53
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +1
Query: 43 ESIKKIMDDTEAFEKEQE--AERLRAEQTAANALLNRRAQTSADDVVNRADANISTAFS 213
E +K++ + F+++ + +ER + +TAANA+L RR A DVV + +A + TA++
Sbjct: 1805 EHLKELQSKFDEFKQKVKNGSERFTSCETAANAIL-RRNPPFARDVVKKQEA-LRTAWN 1861
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +1
Query: 43 ESIKKIMDDTEAFEKEQE--AERLRAEQTAANALLNRRAQTSADDVVNRADANISTAFS 213
E +K++ + F+++ + +ER + +TAANA+L RR A DVV + +A + TA++
Sbjct: 1805 EHLKELQSKFDEFKQKVKNGSERFTSCETAANAIL-RRNPPFARDVVKKQEA-LRTAWN 1861
>Z35602-1|CAA84669.1| 1469|Caenorhabditis elegans Hypothetical protein
R13G10.1 protein.
Length = 1469
Score = 28.7 bits (61), Expect = 3.0
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Frame = +1
Query: 22 KIDRLFKESIKKIMDDTE-AFEKEQEAERLRAEQTAA---NALLNRRAQTSADDVV---- 177
K+DR+F E ++K D E A ++ + E+ A QTA N +A+ ++
Sbjct: 902 KMDRMFMELVQKNKDSIEQAKDRMGQLEQDIARQTAIIENNPSHLEQAEKKLSELEHMCL 961
Query: 178 ---NRADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTA 348
+ ADA + + G ++S + + AR+T ++ D T
Sbjct: 962 EKRSEADALAQLEVGEDVKGIDIINAQLQTSTASIDAQRARYTEAVAARREADAAYQTTV 1021
Query: 349 DEYNSLVRTV--LLRLIE 396
D YN + +T L+R+I+
Sbjct: 1022 DNYNMVKQTYDELMRIID 1039
>L35274-1|AAA62647.1| 1469|Caenorhabditis elegans chromosome
condensation protein protein.
Length = 1469
Score = 28.7 bits (61), Expect = 3.0
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Frame = +1
Query: 22 KIDRLFKESIKKIMDDTE-AFEKEQEAERLRAEQTAA---NALLNRRAQTSADDVV---- 177
K+DR+F E ++K D E A ++ + E+ A QTA N +A+ ++
Sbjct: 902 KMDRMFMELVQKNKDSIEQAKDRMGQLEQDIARQTAIIENNPSHLEQAEKKLSELEHMCL 961
Query: 178 ---NRADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTA 348
+ ADA + + G ++S + + AR+T ++ D T
Sbjct: 962 EKRSEADALAQLEVGEDVKGIDIINAQLQTSTASIDAQRARYTEAVAARREADAAYQTTV 1021
Query: 349 DEYNSLVRTV--LLRLIE 396
D YN + +T L+R+I+
Sbjct: 1022 DNYNMVKQTYDELMRIID 1039
>AC006790-7|AAF60731.1| 547|Caenorhabditis elegans Suppressor of
mec and unc defectsprotein 2 protein.
Length = 547
Score = 28.3 bits (60), Expect = 4.0
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 28 DRLFKESIKKIMDDTEAFEKEQEAERLRAEQTAANALLNRRAQTSADD-VVNRADANIST 204
DR F++S ++ E +EQ+ ER RAEQ R Q A + R + S+
Sbjct: 368 DRYFEKSANSRREE-EQNRREQQRERERAEQERRREREKEREQEKAKEREKKRKELEESS 426
Query: 205 AFSDPLPG 228
+ + PG
Sbjct: 427 GYDECYPG 434
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 4/104 (3%)
Frame = +1
Query: 4 AEECYVKIDRLFKESIKKIMDDTEAFEKEQEAER--LRAEQTAANALL--NRRAQTSADD 171
AEE K++ E +DD A EKE+ AE+ E T A + ++T +
Sbjct: 549 AEETKPKVESFKSEETTVAIDDMPALEKEESAEKKETTGEPTTTEAAVETTEASETPKPE 608
Query: 172 VVNRADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAE 303
+N+ + P + E E T A T+E
Sbjct: 609 AKPELLSNLEDVLTLTTPETETIEGSGEREEPTTSAPAAEATSE 652
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/104 (24%), Positives = 39/104 (37%), Gaps = 4/104 (3%)
Frame = +1
Query: 4 AEECYVKIDRLFKESIKKIMDDTEAFEKEQEAER--LRAEQTAANALL--NRRAQTSADD 171
AEE K++ E +DD A EKE+ AE+ E T A + ++T +
Sbjct: 549 AEETKPKVESFKSEETTVAIDDMPALEKEESAEKKETTGEPTTTEAAVETTEASETPKPE 608
Query: 172 VVNRADANISTAFSDPLPGSSAPRYMYESSESDTYMEPARHTAE 303
+N+ + P + E E T A T+E
Sbjct: 609 AKPELLSNLEDVLTLTTPETETIEGSGEREEPTTSAPAAEATSE 652
>Z70284-13|CAB54280.1| 639|Caenorhabditis elegans Hypothetical
protein K07F5.13c protein.
Length = 639
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 115 EQTAANALLNRRAQTSADDV-VNRADANISTAFSDP--LPGSSAPRYMYESSESDTYMEP 285
+QTA + + R A + + N T+F+ P LPG++AP+ + S ++ + P
Sbjct: 122 QQTAKSPVATRLAAFKSGTLGAGSLSGNTPTSFATPSALPGTNAPQSSFLSPANNLNVAP 181
Query: 286 ARHTAEHYT 312
A + + T
Sbjct: 182 AAYRPPYST 190
>Z70284-11|CAA94281.1| 612|Caenorhabditis elegans Hypothetical
protein K07F5.13a protein.
Length = 612
Score = 27.9 bits (59), Expect = 5.2
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 115 EQTAANALLNRRAQTSADDV-VNRADANISTAFSDP--LPGSSAPRYMYESSESDTYMEP 285
+QTA + + R A + + N T+F+ P LPG++AP+ + S ++ + P
Sbjct: 95 QQTAKSPVATRLAAFKSGTLGAGSLSGNTPTSFATPSALPGTNAPQSSFLSPANNLNVAP 154
Query: 286 ARHTAEHYT 312
A + + T
Sbjct: 155 AAYRPPYST 163
>Z46828-3|CAA86858.2| 363|Caenorhabditis elegans Hypothetical
protein R03D7.5 protein.
Length = 363
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 192 GVGTINNIVCGRLRSPVQKSV 130
G G +N+ CG++ SP++K V
Sbjct: 27 GSGRFSNVYCGQMISPIEKEV 47
>AC024776-20|AAK68473.2| 460|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 274 protein.
Length = 460
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -2
Query: 400 LFRLNAKEP--S*PGNCTRRQCTPRCSPCPDRCNVRRYVGRVPCTCPILNFR 251
+ R++ P S PG T+ T C+ C DR N +RY G C I+ FR
Sbjct: 12 IHRISTSSPDTSPPGTSTQDD-TDGCAVCGDRVNGKRY-GAPACLGCIVFFR 61
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +1
Query: 40 KESIKKIMDDTEAFEKEQ---EAERLRAEQTAA 129
+E KKI ++TE +K++ EA++ RAE+ AA
Sbjct: 2308 EEIQKKIQEETEKLDKQKETFEAQKKRAEELAA 2340
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +1
Query: 40 KESIKKIMDDTEAFEKEQ---EAERLRAEQTAA 129
+E KKI ++TE +K++ EA++ RAE+ AA
Sbjct: 2308 EEIQKKIQEETEKLDKQKETFEAQKKRAEELAA 2340
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +1
Query: 223 PGSSAPRYMYESSESDTYMEPARHTAEHYTDQDKDYNAAYTA 348
P S +P Y S + TY HT DK +NA TA
Sbjct: 406 PASMSPLVRYGSLRAPTYSSSIDHTKLMLDALDKRFNAKSTA 447
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +1
Query: 40 KESIKKIMDDTEAFEKEQ---EAERLRAEQTAA 129
+E KKI ++TE +K++ EA++ RAE+ AA
Sbjct: 122 EEIQKKIQEETEKLDKQKETFEAQKKRAEELAA 154
>AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-related
protein 2A protein.
Length = 826
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 82 EKEQEAERLR-AEQTAANALLNRRAQTSADDVVNRADANISTAFSDPLPGSSAP 240
+K E +R+R A + AA N ++ S DD V ++ S P P + P
Sbjct: 440 QKYAEQDRIRYARKKAALEQSNEQSNESTDDAVESDSDDVPAPQSPPTPSPADP 493
>AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase protein
2 protein.
Length = 826
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +1
Query: 82 EKEQEAERLR-AEQTAANALLNRRAQTSADDVVNRADANISTAFSDPLPGSSAP 240
+K E +R+R A + AA N ++ S DD V ++ S P P + P
Sbjct: 440 QKYAEQDRIRYARKKAALEQSNEQSNESTDDAVESDSDDVPAPQSPPTPSPADP 493
>AC006674-8|AAF39938.2| 131|Caenorhabditis elegans Hypothetical
protein K12H6.9 protein.
Length = 131
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 436 LLCATDSLEWPALFRLNAK 380
+ CA D+L+W ALF + +K
Sbjct: 12 VFCAADALDWTALFGIQSK 30
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +1
Query: 40 KESIKKIMDDTEAFEKEQ---EAERLRAEQTAA 129
+E KKI ++TE +K++ EA++ RAE+ AA
Sbjct: 2308 EEIQKKIQEETEKLDKQKETFEAQKKRAEELAA 2340
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +1
Query: 40 KESIKKIMDDTEAFEKEQ---EAERLRAEQTAA 129
+E KKI ++TE +K++ EA++ RAE+ AA
Sbjct: 2308 EEIQKKIQEETEKLDKQKETFEAQKKRAEELAA 2340
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.127 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,101,518
Number of Sequences: 27780
Number of extensions: 214789
Number of successful extensions: 680
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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