Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15g14
         (384 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   3.7  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   3.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   3.7  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   6.5  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 276 DFYVESNSVDQTHKVH 229
           ++Y ESN +D+T   H
Sbjct: 392 NYYFESNKIDETTLKH 407


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +2

Query: 302 LTFSTRCQFMRNEEKKIVNKKFQNE 376
           +TF   CQ  +N E  I+ +    E
Sbjct: 617 ITFDYMCQSSKNSENSIMQRASMKE 641


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 276 DFYVESNSVDQTHKVH 229
           ++Y ESN +D+T   H
Sbjct: 392 NYYFESNKIDETTLKH 407


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -2

Query: 251 WIKLIKYINY 222
           W++L+K+ NY
Sbjct: 158 WVELLKHFNY 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,510
Number of Sequences: 438
Number of extensions: 1008
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)