Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15g10
(398 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC026280-1|AAH26280.1| 715|Homo sapiens NCK interacting protein... 31 1.9
BC016052-1|AAH16052.1| 715|Homo sapiens NCK interacting protein... 31 1.9
AY453794-1|AAR83735.1| 651|Homo sapiens wasp-interacting SH3 pr... 31 1.9
AJ242655-1|CAB65089.2| 722|Homo sapiens putative intermediate f... 31 1.9
AF303581-1|AAK09094.1| 722|Homo sapiens SPIN90 protein. 31 1.9
AF178432-1|AAF35985.1| 722|Homo sapiens SH3 protein protein. 31 1.9
AB069982-1|BAB63205.1| 715|Homo sapiens HeLa mDia interacting p... 31 1.9
AB069981-1|BAB63204.1| 715|Homo sapiens mDia interacting protei... 31 1.9
>BC026280-1|AAH26280.1| 715|Homo sapiens NCK interacting protein
with SH3 domain protein.
Length = 715
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 156 ILRSVMATIIHVASQ-DAQLRAFSCGHNSLEC-LRVVVQHKSVSLNSLRVLIFKCF--LC 323
++R + ++H+ + D ++ C N E L +V ++ SLR+L+ KCF +C
Sbjct: 402 VIRCYLEELLHILTDADPEVCKKMCKRNEFESVLALVAYYQMEHRASLRLLLLKCFGAMC 461
Query: 324 SL 329
SL
Sbjct: 462 SL 463
>BC016052-1|AAH16052.1| 715|Homo sapiens NCK interacting protein
with SH3 domain protein.
Length = 715
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 156 ILRSVMATIIHVASQ-DAQLRAFSCGHNSLEC-LRVVVQHKSVSLNSLRVLIFKCF--LC 323
++R + ++H+ + D ++ C N E L +V ++ SLR+L+ KCF +C
Sbjct: 402 VIRCYLEELLHILTDADPEVCKKMCKRNEFESVLALVAYYQMEHRASLRLLLLKCFGAMC 461
Query: 324 SL 329
SL
Sbjct: 462 SL 463
>AY453794-1|AAR83735.1| 651|Homo sapiens wasp-interacting SH3
protein isoform B protein.
Length = 651
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 156 ILRSVMATIIHVASQ-DAQLRAFSCGHNSLEC-LRVVVQHKSVSLNSLRVLIFKCF--LC 323
++R + ++H+ + D ++ C N E L +V ++ SLR+L+ KCF +C
Sbjct: 402 VIRCYLEELLHILTDADPEVCKKMCKRNEFESVLALVAYYQMEHRASLRLLLLKCFGAMC 461
Query: 324 SL 329
SL
Sbjct: 462 SL 463
>AJ242655-1|CAB65089.2| 722|Homo sapiens putative intermediate
filaments interacting protein protein.
Length = 722
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 156 ILRSVMATIIHVASQ-DAQLRAFSCGHNSLEC-LRVVVQHKSVSLNSLRVLIFKCF--LC 323
++R + ++H+ + D ++ C N E L +V ++ SLR+L+ KCF +C
Sbjct: 409 VIRCYLEELLHILTDADPEVCKKMCKRNEFESVLALVAYYQMEHRASLRLLLLKCFGAMC 468
Query: 324 SL 329
SL
Sbjct: 469 SL 470
>AF303581-1|AAK09094.1| 722|Homo sapiens SPIN90 protein.
Length = 722
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 156 ILRSVMATIIHVASQ-DAQLRAFSCGHNSLEC-LRVVVQHKSVSLNSLRVLIFKCF--LC 323
++R + ++H+ + D ++ C N E L +V ++ SLR+L+ KCF +C
Sbjct: 409 VIRCYLEELLHILTDADPEVCKKMCKRNEFESVLALVAYYQMEHRASLRLLLLKCFGAMC 468
Query: 324 SL 329
SL
Sbjct: 469 SL 470
>AF178432-1|AAF35985.1| 722|Homo sapiens SH3 protein protein.
Length = 722
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 156 ILRSVMATIIHVASQ-DAQLRAFSCGHNSLEC-LRVVVQHKSVSLNSLRVLIFKCF--LC 323
++R + ++H+ + D ++ C N E L +V ++ SLR+L+ KCF +C
Sbjct: 409 VIRCYLEELLHILTDADPEVCKKMCKRNEFESVLALVAYYQMEHRASLRLLLLKCFGAMC 468
Query: 324 SL 329
SL
Sbjct: 469 SL 470
>AB069982-1|BAB63205.1| 715|Homo sapiens HeLa mDia interacting
protein protein.
Length = 715
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 156 ILRSVMATIIHVASQ-DAQLRAFSCGHNSLEC-LRVVVQHKSVSLNSLRVLIFKCF--LC 323
++R + ++H+ + D ++ C N E L +V ++ SLR+L+ KCF +C
Sbjct: 402 VIRCYLEELLHILTDADPEVCKKMCKRNEFESVLALVAYYQMEHRASLRLLLLKCFGAMC 461
Query: 324 SL 329
SL
Sbjct: 462 SL 463
>AB069981-1|BAB63204.1| 715|Homo sapiens mDia interacting protein-1
protein.
Length = 715
Score = 30.7 bits (66), Expect = 1.9
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Frame = +3
Query: 156 ILRSVMATIIHVASQ-DAQLRAFSCGHNSLEC-LRVVVQHKSVSLNSLRVLIFKCF--LC 323
++R + ++H+ + D ++ C N E L +V ++ SLR+L+ KCF +C
Sbjct: 402 VIRCYLEELLHILTDADPEVCKKMCKRNEFESVLALVAYYQMEHRASLRLLLLKCFGAMC 461
Query: 324 SL 329
SL
Sbjct: 462 SL 463
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,133,982
Number of Sequences: 237096
Number of extensions: 949075
Number of successful extensions: 1805
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1805
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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