Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15f12
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical pr... 172 1e-43
Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical pr... 163 8e-41
Z22180-10|CAO82052.1| 360|Caenorhabditis elegans Hypothetical p... 159 1e-39
Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical pr... 122 2e-28
Z22180-9|CAO82051.1| 304|Caenorhabditis elegans Hypothetical pr... 97 8e-21
Z93394-4|CAD59168.1| 193|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z93394-3|CAD59167.1| 228|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z81044-12|CAB02811.2| 527|Caenorhabditis elegans Hypothetical p... 27 9.5
Z69794-4|CAA93678.3| 654|Caenorhabditis elegans Hypothetical pr... 27 9.5
U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical pr... 27 9.5
AY494975-1|AAR87492.1| 486|Caenorhabditis elegans collagen/olfa... 27 9.5
AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin (col... 27 9.5
>Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical
protein K11H3.1a protein.
Length = 371
Score = 172 bits (419), Expect = 1e-43
Identities = 87/165 (52%), Positives = 113/165 (68%), Gaps = 1/165 (0%)
Frame = +3
Query: 78 FKYFVRDCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEE 254
F+YF I M+ K KV I+GSGNWGSAIA+IVG S + F+ V MWV+EE
Sbjct: 9 FRYFGTTSTIATMSPK----KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEE 64
Query: 255 IIEGKKLTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICS 434
I+ G+KL+E+IN HEN+KYLPG LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC
Sbjct: 65 IVNGEKLSEVINNRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICE 124
Query: 435 TLLGKIKPTAAALSLIKGFDIAEGGGIDLISHIITRCLKIPCAVL 569
L+GKI A+SLIKG + GG+ LIS I LKI +VL
Sbjct: 125 KLVGKIPADTQAISLIKGVSTEKRGGLKLISEEIKEILKIEVSVL 169
>Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical
protein K11H3.1b protein.
Length = 392
Score = 163 bits (396), Expect = 8e-41
Identities = 89/174 (51%), Positives = 115/174 (66%), Gaps = 10/174 (5%)
Frame = +3
Query: 78 FKYFVRDCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEE 254
F+YF I M+ K KV I+GSGNWGSAIA+IVG S + F+ V MWV+EE
Sbjct: 21 FRYFGTTSTIATMSPK----KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEE 76
Query: 255 IIEGKKLTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICS 434
I+ G+KL+E+IN HEN+KYLPG LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC
Sbjct: 77 IVNGEKLSEVINNRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICE 136
Query: 435 TLLGKIKPTAAALSLIKG--FD-------IAEGGGIDLISHIITRCLKIPCAVL 569
L+GKI A+SLIKG FD + GG+ LIS I LKI +VL
Sbjct: 137 KLVGKIPADTQAISLIKGISFDKTNQGVSTEKRGGLKLISEEIKEILKIEVSVL 190
>Z22180-10|CAO82052.1| 360|Caenorhabditis elegans Hypothetical
protein K11H3.1d protein.
Length = 360
Score = 159 bits (387), Expect = 1e-39
Identities = 85/157 (54%), Positives = 109/157 (69%), Gaps = 10/157 (6%)
Frame = +3
Query: 129 PKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHEN 305
PK KV I+GSGNWGSAIA+IVG S + F+ V MWV+EEI+ G+KL+E+IN HEN
Sbjct: 3 PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHEN 61
Query: 306 VKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIK 485
+KYLPG LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC L+GKI A+SLIK
Sbjct: 62 IKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIK 121
Query: 486 G--FD-------IAEGGGIDLISHIITRCLKIPCAVL 569
G FD + GG+ LIS I LKI +VL
Sbjct: 122 GISFDKTNQGVSTEKRGGLKLISEEIKEILKIEVSVL 158
>Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical
protein F47G4.3 protein.
Length = 374
Score = 122 bits (294), Expect = 2e-28
Identities = 68/153 (44%), Positives = 91/153 (59%), Gaps = 7/153 (4%)
Frame = +3
Query: 132 KNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGK---KLTEIINETH 299
+ K+ IVG GNWGSAIA +VG+ + F+ V++W + G + E IN TH
Sbjct: 21 RKKIAIVGGGNWGSAIACVVGKTVKAQDEVFQPIVSIWCRDSRKPGDLSPSIAETINSTH 80
Query: 300 ENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSL 479
EN KYLPG ++P NVVA ++EA + A +LI VVPHQ + IC L GK++ A A+SL
Sbjct: 81 ENPKYLPGRRIPDNVVATSSLLEACQSAHILILVVPHQGIPQICDELRGKLQKGAHAISL 140
Query: 480 IKGFDIA-EGGGI--DLISHIITRCLKIPCAVL 569
KG + E G I LIS I R L + C+VL
Sbjct: 141 TKGISSSCENGEIKMQLISEDIERALGVQCSVL 173
>Z22180-9|CAO82051.1| 304|Caenorhabditis elegans Hypothetical
protein K11H3.1c protein.
Length = 304
Score = 97.1 bits (231), Expect = 8e-21
Identities = 45/73 (61%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Frame = +3
Query: 129 PKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHEN 305
PK KV I+GSGNWGSAIA+IVG S + F+ V MWV+EEI+ G+KL+E+IN HEN
Sbjct: 3 PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHEN 61
Query: 306 VKYLPGHKLPSNV 344
+KYLPG LP+NV
Sbjct: 62 IKYLPGKVLPNNV 74
>Z93394-4|CAD59168.1| 193|Caenorhabditis elegans Hypothetical
protein Y48E1C.4b protein.
Length = 193
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 262 SIISSYTHIVTLSSKFDRLAAFRPTIFAIAEPQF 161
++ S + +T++S++ LA +PT+ A P F
Sbjct: 2 NLASRVSGFLTMTSRYSSLATLKPTVAAALAPNF 35
>Z93394-3|CAD59167.1| 228|Caenorhabditis elegans Hypothetical
protein Y48E1C.4a protein.
Length = 228
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = -3
Query: 262 SIISSYTHIVTLSSKFDRLAAFRPTIFAIAEPQF 161
++ S + +T++S++ LA +PT+ A P F
Sbjct: 2 NLASRVSGFLTMTSRYSSLATLKPTVAAALAPNF 35
>Z81044-12|CAB02811.2| 527|Caenorhabditis elegans Hypothetical
protein C30H6.5 protein.
Length = 527
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -2
Query: 536 NNM*YK-IDATTFGYIKSLNQRQSSCSWLYFSKQSR 432
NN Y DAT G ++ L +S CSW + ++ +
Sbjct: 424 NNSIYNSFDATIVGGLQDLESCESECSWSHIRRREK 459
>Z69794-4|CAA93678.3| 654|Caenorhabditis elegans Hypothetical
protein R03G8.3 protein.
Length = 654
Score = 27.1 bits (57), Expect = 9.5
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +3
Query: 171 SAIAKIVGRNAASL-SNFEDRVTMWVYEEIIEGKKLTEIINETHENVKYLPGHKLPSNVV 347
+ + ++ NA + ++F+ R TM ++ K N T + +PG K S +
Sbjct: 450 TGLLNVMRENAQKIQTHFDTRATM------LDILKYQSASNFTDLDPLIIPGEKGYSYIR 503
Query: 348 AVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIKGFDIAEG 506
PD++ ++ + + QF +T ST K A++L +I EG
Sbjct: 504 TQPDILRNCRNMPIPMQYCICQFNKTQVSTKSETAKGVGEAVALAVNNEIEEG 556
>U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical
protein T12E12.1 protein.
Length = 482
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 167 GFCYCENCWSKCCES 211
G C+CE+CW ES
Sbjct: 146 GHCFCEHCWKSHVES 160
>AY494975-1|AAR87492.1| 486|Caenorhabditis elegans
collagen/olfactomedin domain containingprotein 2
protein.
Length = 486
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 206 RSISTNNFRNSRT-PVSRSNDANFVLWL 126
+S++ NFR+ R P+SR +A+ +LWL
Sbjct: 35 QSLTELNFRSKRDIPLSRGKNASDILWL 62
>AF000262-4|AAN60526.2| 486|Caenorhabditis elegans Colmedin
(collagen plus olfactomedin)family protein 2 protein.
Length = 486
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = -2
Query: 206 RSISTNNFRNSRT-PVSRSNDANFVLWL 126
+S++ NFR+ R P+SR +A+ +LWL
Sbjct: 35 QSLTELNFRSKRDIPLSRGKNASDILWL 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,253,278
Number of Sequences: 27780
Number of extensions: 207494
Number of successful extensions: 713
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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