Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15e14
         (489 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   1.8  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   1.8  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   4.2  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   4.2  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   4.2  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   4.2  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    23   5.6  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.4  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    22   9.8  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    22   9.8  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
 Frame = +1

Query: 208 GAGQQSGRVTRVAQRGRPATRPTGRVLRSQQQKPVPSRE-QLDAELDQYMASSKSALDLE 384
           G  QQ GR+    Q    A+ P G   R  +Q  + ++E Q      Q       A    
Sbjct: 743 GRSQQRGRMGTSVQTKTSASEPAGASSREIEQMQIRAQEIQTQINYLQEQQGELEATIQR 802

Query: 385 LEAYMREAEL 414
           L A +++ E+
Sbjct: 803 LTAKLKQQEM 812


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +1

Query: 232 VTRVAQRGRPATRPTGRVLRSQQQKPVPSREQLDAELDQ 348
           V R   RG+   +P  +    QQQ+P   ++QL     Q
Sbjct: 241 VVRRRYRGKATGKPRSQQQPQQQQQPQQKQQQLQRRQQQ 279


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 183 PRPASAAPEPPQWSPGTSH 127
           P P +A+ E P+W   T+H
Sbjct: 642 PNPNTASSEFPEWPKHTAH 660


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 183 PRPASAAPEPPQWSPGTSH 127
           P P +A+ E P+W   T+H
Sbjct: 642 PNPNTASSEFPEWPKHTAH 660


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 183 PRPASAAPEPPQWSPGTSH 127
           P P +A+ E P+W   T+H
Sbjct: 528 PNPNTASSEFPEWPKHTAH 546


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 204 TESSPDCPRPASAAPEPP 151
           T + P  PRP    P+PP
Sbjct: 205 TPTQPQPPRPGGMYPQPP 222


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 332 TRNWTNTWPAPSP 370
           TR  +NTWP P P
Sbjct: 55  TRARSNTWPLPRP 67


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +1

Query: 250 RGRPATRPTGRVLRSQQQKPVPSREQLDAELDQYMASSKSALDLELEAYMREA 408
           +GR  T+P+ RVL  Q ++         +   Q  +SS S+   +  +Y  E+
Sbjct: 88  QGRELTKPSRRVLEGQSER----ESYYSSSHYQSSSSSSSSSSFQQSSYESES 136


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 140 GDHCGGSGAAEA 175
           G HCGG G +++
Sbjct: 292 GSHCGGGGGSDS 303


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
 Frame = +3

Query: 216 PAVRARHQGGAARPPRH--QTHRSSAP 290
           PAV+++++     PP+H  +  RSS+P
Sbjct: 56  PAVQSKNRMPPVPPPKHSQRRRRSSSP 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 441,910
Number of Sequences: 2352
Number of extensions: 8486
Number of successful extensions: 29
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)