Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15e14
(489 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001747-1|AAN71502.1| 421|Drosophila melanogaster RE74585p pro... 42 3e-04
AE014297-123|AAN13285.1| 421|Drosophila melanogaster CG9775-PC,... 42 3e-04
AE014297-122|AAF52112.1| 421|Drosophila melanogaster CG9775-PA,... 42 3e-04
AF172637-1|AAD46930.1| 266|Drosophila melanogaster LD24793p pro... 33 0.21
AE014297-550|AAF54070.1| 266|Drosophila melanogaster CG1101-PA ... 33 0.21
AE014297-725|AAN14311.1| 228|Drosophila melanogaster CG31464-PA... 30 2.0
AY058607-1|AAL13836.1| 999|Drosophila melanogaster LD30037p pro... 29 2.6
AF159852-1|AAD54965.1| 999|Drosophila melanogaster RNA-binding ... 29 2.6
AF132213-1|AAF61321.1| 999|Drosophila melanogaster smaug protei... 29 2.6
AE014296-1566|AAN11981.1| 999|Drosophila melanogaster CG5263-PC... 29 2.6
AE014296-1565|AAF50334.3| 999|Drosophila melanogaster CG5263-PB... 29 2.6
AE014296-1564|AAF50333.3| 999|Drosophila melanogaster CG5263-PA... 29 2.6
AY071656-1|AAL49278.1| 788|Drosophila melanogaster RE73548p pro... 29 4.5
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD... 28 7.9
AE014134-456|AAF51219.1| 521|Drosophila melanogaster CG2843-PA ... 28 7.9
>BT001747-1|AAN71502.1| 421|Drosophila melanogaster RE74585p
protein.
Length = 421
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +1
Query: 214 GQQSGRVTRVAQRGRPATR-PTGRVLRSQQQKPVPSREQLDAELDQYMASSKSALDLELE 390
G +SG +V +RGR +R PTG+ Q+P RE LD ELDQYM+++KS +D L+
Sbjct: 368 GVKSGPQQQV-RRGRSRSRKPTGK-----PQRPEVKREDLDMELDQYMSTTKSEMDYLLK 421
>AE014297-123|AAN13285.1| 421|Drosophila melanogaster CG9775-PC,
isoform C protein.
Length = 421
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +1
Query: 214 GQQSGRVTRVAQRGRPATR-PTGRVLRSQQQKPVPSREQLDAELDQYMASSKSALDLELE 390
G +SG +V +RGR +R PTG+ Q+P RE LD ELDQYM+++KS +D L+
Sbjct: 368 GVKSGPQQQV-RRGRSRSRKPTGK-----PQRPEVKREDLDMELDQYMSTTKSEMDYLLK 421
>AE014297-122|AAF52112.1| 421|Drosophila melanogaster CG9775-PA,
isoform A protein.
Length = 421
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Frame = +1
Query: 214 GQQSGRVTRVAQRGRPATR-PTGRVLRSQQQKPVPSREQLDAELDQYMASSKSALDLELE 390
G +SG +V +RGR +R PTG+ Q+P RE LD ELDQYM+++KS +D L+
Sbjct: 368 GVKSGPQQQV-RRGRSRSRKPTGK-----PQRPEVKREDLDMELDQYMSTTKSEMDYLLK 421
>AF172637-1|AAD46930.1| 266|Drosophila melanogaster LD24793p
protein.
Length = 266
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 205 RGAGQQSGRVTRVAQRGRPATRPTGRVLRSQQQKPVPSREQLDAELDQYMASSK 366
RG GQ G R +R +P R +++ P P+ E+LDAELD Y+ K
Sbjct: 214 RGGGQAGGTARRGFKRP-VGGKPAAGGQRRERKAP-PTAEELDAELDSYINDMK 265
>AE014297-550|AAF54070.1| 266|Drosophila melanogaster CG1101-PA
protein.
Length = 266
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +1
Query: 205 RGAGQQSGRVTRVAQRGRPATRPTGRVLRSQQQKPVPSREQLDAELDQYMASSK 366
RG GQ G R +R +P R +++ P P+ E+LDAELD Y+ K
Sbjct: 214 RGGGQAGGTARRGFKRP-VGGKPAAGGQRRERKAP-PTAEELDAELDSYINDMK 265
>AE014297-725|AAN14311.1| 228|Drosophila melanogaster CG31464-PA
protein.
Length = 228
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 441 NTHHYWSLKQLGFSHVGF*LKIQGGLG 361
NT W LKQ GF+H G L G+G
Sbjct: 149 NTCRIWQLKQSGFNHAGVLLCTVAGIG 175
>AY058607-1|AAL13836.1| 999|Drosophila melanogaster LD30037p
protein.
Length = 999
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 284 CSAVSNRSRCPAGNSWTRNWTNTWPAPSPP 373
CS+V++ S CPA S + TN W +PP
Sbjct: 321 CSSVASSSLCPASGSRSSR-TNDWQTIAPP 349
>AF159852-1|AAD54965.1| 999|Drosophila melanogaster RNA-binding
protein Smaug protein.
Length = 999
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 284 CSAVSNRSRCPAGNSWTRNWTNTWPAPSPP 373
CS+V++ S CPA S + TN W +PP
Sbjct: 321 CSSVASSSLCPASGSRSSR-TNDWQTIAPP 349
>AF132213-1|AAF61321.1| 999|Drosophila melanogaster smaug protein
protein.
Length = 999
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 284 CSAVSNRSRCPAGNSWTRNWTNTWPAPSPP 373
CS+V++ S CPA S + TN W +PP
Sbjct: 321 CSSVASSSLCPASGSRSSR-TNDWQTIAPP 349
>AE014296-1566|AAN11981.1| 999|Drosophila melanogaster CG5263-PC,
isoform C protein.
Length = 999
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 284 CSAVSNRSRCPAGNSWTRNWTNTWPAPSPP 373
CS+V++ S CPA S + TN W +PP
Sbjct: 321 CSSVASSSLCPASGSRSSR-TNDWQTIAPP 349
>AE014296-1565|AAF50334.3| 999|Drosophila melanogaster CG5263-PB,
isoform B protein.
Length = 999
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 284 CSAVSNRSRCPAGNSWTRNWTNTWPAPSPP 373
CS+V++ S CPA S + TN W +PP
Sbjct: 321 CSSVASSSLCPASGSRSSR-TNDWQTIAPP 349
>AE014296-1564|AAF50333.3| 999|Drosophila melanogaster CG5263-PA,
isoform A protein.
Length = 999
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 284 CSAVSNRSRCPAGNSWTRNWTNTWPAPSPP 373
CS+V++ S CPA S + TN W +PP
Sbjct: 321 CSSVASSSLCPASGSRSSR-TNDWQTIAPP 349
>AY071656-1|AAL49278.1| 788|Drosophila melanogaster RE73548p
protein.
Length = 788
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/63 (30%), Positives = 24/63 (38%)
Frame = +1
Query: 208 GAGQQSGRVTRVAQRGRPATRPTGRVLRSQQQKPVPSREQLDAELDQYMASSKSALDLEL 387
GAG + V VA G A PT + P P Q + E Q S ++ EL
Sbjct: 429 GAGLPAAAVAGVASPGAMAAAPTKGFFDNLAANPSPEEHQ-EVEQQQQQQQSTQQVEPEL 487
Query: 388 EAY 396
Y
Sbjct: 488 SGY 490
>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
protein.
Length = 2351
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 253 GRPATRPTGRVLRSQQQK-PVPSREQLDAELD 345
G+P+ PTGR + QQQ+ P P ++A D
Sbjct: 1537 GKPSKAPTGRGAKKQQQQAPAPPAPPVEASGD 1568
>AE014134-456|AAF51219.1| 521|Drosophila melanogaster CG2843-PA
protein.
Length = 521
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +1
Query: 202 SRGAGQQSGRVTRVAQRGRPATRPTGRVLRSQQQKPVPSREQLDAELDQYMASSKSALDL 381
SR + R+A+R P +RPTG+ S+ + RE +D A +
Sbjct: 403 SRSRSSKGDDKRRIAERP-PPSRPTGKPKLSEADREARLREMMD-NATWREADRSQVVRK 460
Query: 382 ELEAYMRE 405
EAY RE
Sbjct: 461 HREAYARE 468
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,574,084
Number of Sequences: 53049
Number of extensions: 439603
Number of successful extensions: 1916
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1914
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1726192251
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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