Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15e12
         (213 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062716-1|AAH62716.1|  140|Homo sapiens ribosomal protein L23 p...   111   3e-25
X55954-1|CAA39417.1|  140|Homo sapiens HL23 ribosomal protein pr...   111   4e-25
X52839-1|CAA37023.1|  140|Homo sapiens ribosomal protein L17 pro...   111   4e-25
BC106061-1|AAI06062.1|  140|Homo sapiens RPL23 protein protein.       111   4e-25
BC104651-1|AAI04652.1|  140|Homo sapiens ribosomal protein L23 p...   111   4e-25
BC010114-1|AAH10114.1|  140|Homo sapiens ribosomal protein L23 p...   111   4e-25
BC003518-1|AAH03518.1|  134|Homo sapiens Similar to ribosomal pr...   111   4e-25
AB061827-1|BAB79465.1|  140|Homo sapiens ribosomal protein L23 p...   111   4e-25
AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1...    29   2.1  
AL834486-1|CAD39144.1|  568|Homo sapiens hypothetical protein pr...    29   2.1  
AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein pr...    29   2.1  
AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein.     29   2.1  

>BC062716-1|AAH62716.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  111 bits (268), Expect = 3e-25
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = +3

Query: 6   VMPAVVIXQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 173
           V PAVVI QRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 76  VRPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>X55954-1|CAA39417.1|  140|Homo sapiens HL23 ribosomal protein
           protein.
          Length = 140

 Score =  111 bits (267), Expect = 4e-25
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = +3

Query: 6   VMPAVVIXQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 173
           V PAVVI QRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 76  VHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>X52839-1|CAA37023.1|  140|Homo sapiens ribosomal protein L17
           protein.
          Length = 140

 Score =  111 bits (267), Expect = 4e-25
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = +3

Query: 6   VMPAVVIXQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 173
           V PAVVI QRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 76  VHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC106061-1|AAI06062.1|  140|Homo sapiens RPL23 protein protein.
          Length = 140

 Score =  111 bits (267), Expect = 4e-25
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = +3

Query: 6   VMPAVVIXQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 173
           V PAVVI QRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 76  VHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC104651-1|AAI04652.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  111 bits (267), Expect = 4e-25
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = +3

Query: 6   VMPAVVIXQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 173
           V PAVVI QRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 76  VHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC010114-1|AAH10114.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  111 bits (267), Expect = 4e-25
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = +3

Query: 6   VMPAVVIXQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 173
           V PAVVI QRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 76  VHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>BC003518-1|AAH03518.1|  134|Homo sapiens Similar to ribosomal
           protein L23 protein.
          Length = 134

 Score =  111 bits (267), Expect = 4e-25
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = +3

Query: 6   VMPAVVIXQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 173
           V PAVVI QRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 70  VHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 125


>AB061827-1|BAB79465.1|  140|Homo sapiens ribosomal protein L23
           protein.
          Length = 140

 Score =  111 bits (267), Expect = 4e-25
 Identities = 50/56 (89%), Positives = 53/56 (94%)
 Frame = +3

Query: 6   VMPAVVIXQRKPFRRRDGVFIYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 173
           V PAVVI QRK +RR+DGVF+YFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR
Sbjct: 76  VHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGPVAKECADLWPR 131


>AY172136-1|AAO31738.1| 1906|Homo sapiens retinoic acid induced 1
            protein.
          Length = 1906

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 172  RGHRSAHSLATGPVMAEPFISPLLLTMTP 86
            +G   AH L+ GP+   P++ P LL +TP
Sbjct: 1450 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1477


>AL834486-1|CAD39144.1|  568|Homo sapiens hypothetical protein
           protein.
          Length = 568

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 172 RGHRSAHSLATGPVMAEPFISPLLLTMTP 86
           +G   AH L+ GP+   P++ P LL +TP
Sbjct: 112 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 139


>AL834468-1|CAD39127.1| 1285|Homo sapiens hypothetical protein
           protein.
          Length = 1285

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 172 RGHRSAHSLATGPVMAEPFISPLLLTMTP 86
           +G   AH L+ GP+   P++ P LL +TP
Sbjct: 829 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 856


>AB058723-1|BAB47449.1| 1644|Homo sapiens KIAA1820 protein protein.
          Length = 1644

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -3

Query: 172  RGHRSAHSLATGPVMAEPFISPLLLTMTP 86
            +G   AH L+ GP+   P++ P LL +TP
Sbjct: 1454 KGRAGAHGLSKGPLEKRPYLGPALL-LTP 1481


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,095,073
Number of Sequences: 237096
Number of extensions: 435959
Number of successful extensions: 757
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 76,859,062
effective HSP length: 49
effective length of database: 65,241,358
effective search space used: 1370068518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)