Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15e11
(514 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X99293-1|CAA67679.1| 152|Drosophila melanogaster CRP1 protein p... 102 3e-22
U59498-1|AAC47295.1| 152|Drosophila melanogaster nucleoplasmin-... 102 3e-22
AY119592-1|AAM50246.1| 152|Drosophila melanogaster LD16456p pro... 102 3e-22
AE014297-4506|AAF56988.1| 152|Drosophila melanogaster CG7917-PA... 102 3e-22
AE014297-4505|AAF56987.1| 156|Drosophila melanogaster CG7911-PA... 96 2e-20
U59497-1|AAC47294.1| 121|Drosophila melanogaster nucleoplasmin-... 73 2e-13
AY075169-1|AAL68039.1| 244|Drosophila melanogaster AT05815p pro... 31 0.69
AE014297-755|AAF54243.3| 713|Drosophila melanogaster CG31369-PA... 31 1.2
AE014297-2785|AAX52968.1| 512|Drosophila melanogaster CG33518-P... 29 3.7
X51663-1|CAB57859.1| 493|Drosophila melanogaster Abdominal-B pr... 28 8.5
X16134-1|CAA34260.1| 491|Drosophila melanogaster protein ( Dros... 28 8.5
U31961-3|AAA84402.1| 493|Drosophila melanogaster ABD-BI protein. 28 8.5
AE014297-2270|AAF55362.1| 493|Drosophila melanogaster CG11648-P... 28 8.5
>X99293-1|CAA67679.1| 152|Drosophila melanogaster CRP1 protein
protein.
Length = 152
Score = 102 bits (244), Expect = 3e-22
Identities = 50/101 (49%), Positives = 72/101 (71%)
Frame = +1
Query: 85 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 264
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56
Query: 265 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 387
+++V++P+AVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 57 KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>U59498-1|AAC47295.1| 152|Drosophila melanogaster
nucleoplasmin-like protein protein.
Length = 152
Score = 102 bits (244), Expect = 3e-22
Identities = 50/101 (49%), Positives = 72/101 (71%)
Frame = +1
Query: 85 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 264
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56
Query: 265 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 387
+++V++P+AVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 57 KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>AY119592-1|AAM50246.1| 152|Drosophila melanogaster LD16456p
protein.
Length = 152
Score = 102 bits (244), Expect = 3e-22
Identities = 50/101 (49%), Positives = 72/101 (71%)
Frame = +1
Query: 85 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 264
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56
Query: 265 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 387
+++V++P+AVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 57 KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>AE014297-4506|AAF56988.1| 152|Drosophila melanogaster CG7917-PA
protein.
Length = 152
Score = 102 bits (244), Expect = 3e-22
Identities = 50/101 (49%), Positives = 72/101 (71%)
Frame = +1
Query: 85 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 264
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++V
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56
Query: 265 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 387
+++V++P+AVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 57 KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>AE014297-4505|AAF56987.1| 156|Drosophila melanogaster CG7911-PA
protein.
Length = 156
Score = 96.3 bits (229), Expect = 2e-20
Identities = 52/107 (48%), Positives = 70/107 (65%), Gaps = 6/107 (5%)
Frame = +1
Query: 85 MTDEFFYGVTLSSSHQSETWD-PEAKAEY-PRSNKLVIRQALLGPDAKPDELNVIQVEAM 258
M E FYGVTLS ++ P+ EY S+KL+I+Q LGP+AK E NV+Q E
Sbjct: 1 MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTGEFNVVQAETN 60
Query: 259 ----SLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 387
++ +K+P+AVLKVGE+R +R ++EFP+ VTF LVQGSGPV
Sbjct: 61 INDDGEKKTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKLVQGSGPV 107
>U59497-1|AAC47294.1| 121|Drosophila melanogaster
nucleoplasmin-like protein-short protein.
Length = 121
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/68 (50%), Positives = 52/68 (76%)
Frame = +1
Query: 184 LVIRQALLGPDAKPDELNVIQVEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFT 363
+VI+Q LLG +AK +E NV++V +++V++P+AVLK GE+R V D+EF ++ VTF
Sbjct: 1 MVIKQILLGAEAKENEFNVVEVNTP--KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFK 58
Query: 364 LVQGSGPV 387
L++GSGPV
Sbjct: 59 LIKGSGPV 66
>AY075169-1|AAL68039.1| 244|Drosophila melanogaster AT05815p
protein.
Length = 244
Score = 31.5 bits (68), Expect = 0.69
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 116 FHHHISQRHGIQRQKQNTHAATSSSFVKHC*VQMPNQ 226
FHHH Q+ Q+Q+Q HAA +++ H Q P Q
Sbjct: 162 FHHHQQQQQQ-QQQQQQQHAAAAAAAALHAASQHPQQ 197
>AE014297-755|AAF54243.3| 713|Drosophila melanogaster CG31369-PA
protein.
Length = 713
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +2
Query: 116 FHHHISQRHGIQRQKQNTHAATSSSFVKHC*VQMPNQ 226
FHHH Q+ Q+Q+Q HAA +++ H Q P Q
Sbjct: 633 FHHHQQQQ---QQQQQQQHAAAAAAAALHAASQHPQQ 666
>AE014297-2785|AAX52968.1| 512|Drosophila melanogaster CG33518-PA
protein.
Length = 512
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 81 HHDGRVFLWCHPFIITSVRDMGSRGK 158
H GR F++C P SV MG RG+
Sbjct: 445 HLSGRRFVFCFPISTQSVAQMGRRGR 470
>X51663-1|CAB57859.1| 493|Drosophila melanogaster Abdominal-B
protein protein.
Length = 493
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 119 HHHISQRHGIQRQKQNTHAATSSS 190
HHH + H Q+Q+Q HA +SS
Sbjct: 48 HHHSAHPHLQQQQQQQQHAVVASS 71
>X16134-1|CAA34260.1| 491|Drosophila melanogaster protein (
Drosophila Abd-B P3 mRNA. ).
Length = 491
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 119 HHHISQRHGIQRQKQNTHAATSSS 190
HHH + H Q+Q+Q HA +SS
Sbjct: 48 HHHSAHPHLQQQQQQQQHAVVASS 71
>U31961-3|AAA84402.1| 493|Drosophila melanogaster ABD-BI protein.
Length = 493
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 119 HHHISQRHGIQRQKQNTHAATSSS 190
HHH + H Q+Q+Q HA +SS
Sbjct: 48 HHHSAHPHLQQQQQQQQHAVVASS 71
>AE014297-2270|AAF55362.1| 493|Drosophila melanogaster CG11648-PB,
isoform B protein.
Length = 493
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 119 HHHISQRHGIQRQKQNTHAATSSS 190
HHH + H Q+Q+Q HA +SS
Sbjct: 48 HHHSAHPHLQQQQQQQQHAVVASS 71
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,771,301
Number of Sequences: 53049
Number of extensions: 402408
Number of successful extensions: 1436
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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