Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15e07
(537 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 116 1e-26
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 116 1e-26
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 109 2e-24
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 109 2e-24
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 91 4e-19
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 91 4e-19
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 91 4e-19
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 71 7e-13
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 71 7e-13
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 71 7e-13
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 69 2e-12
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 69 2e-12
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 59 2e-09
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 58 4e-09
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 58 4e-09
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 56 2e-08
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 56 2e-08
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 56 2e-08
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 55 4e-08
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 55 4e-08
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 55 4e-08
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 55 4e-08
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 55 4e-08
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 55 4e-08
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 55 4e-08
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 52 3e-07
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 52 3e-07
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 51 5e-07
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 51 5e-07
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 51 5e-07
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 51 6e-07
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 51 6e-07
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 51 6e-07
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 51 6e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 50 8e-07
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 50 8e-07
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 48 3e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 48 3e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 46 1e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 1e-05
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 45 3e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 45 3e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 45 3e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 45 3e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 45 4e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 45 4e-05
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 44 5e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 5e-05
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 44 5e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 44 5e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 44 5e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 43 2e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 43 2e-04
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 42 2e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 4e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 42 4e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 42 4e-04
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 42 4e-04
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 41 5e-04
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 41 5e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 41 6e-04
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 40 0.001
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 39 0.002
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 39 0.002
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 39 0.002
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 39 0.002
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 39 0.003
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 38 0.003
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 38 0.003
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 38 0.003
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 37 0.008
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 37 0.008
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.032
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.032
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.032
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 35 0.043
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 35 0.043
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 34 0.075
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 34 0.075
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 34 0.075
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 34 0.075
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 33 0.099
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 33 0.13
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 33 0.17
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 32 0.23
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 32 0.30
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 31 0.53
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 30 0.92
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 30 1.2
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 30 1.2
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 30 1.2
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 29 1.6
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 29 2.1
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 3.7
Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical pr... 28 4.9
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 28 4.9
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine re... 27 6.5
AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical ... 27 6.5
AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical ... 27 6.5
CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical ... 27 8.6
AF101318-12|AAC69350.2| 400|Caenorhabditis elegans Hypothetical... 27 8.6
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 27 8.6
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 116 bits (278), Expect = 1e-26
Identities = 59/138 (42%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Frame = +2
Query: 122 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 301
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L HF YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 302 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFVGGLS 478
VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K+FVGGL
Sbjct: 59 QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLP 118
Query: 479 SEISDDEIRNFFSEFGTI 532
S+ S+ ++R+ F +FG +
Sbjct: 119 SDYSEQDLRSHFEQFGKV 136
Score = 68.1 bits (159), Expect = 4e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
+++K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF+ ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 386 MAAGEHTINNKKVDPKKAKARHGKIFVG 469
+ + T ++ D KKA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 116 bits (278), Expect = 1e-26
Identities = 59/138 (42%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Frame = +2
Query: 122 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 301
TDN++NGNA ++ N G ++D+K+FVGG+S E +++L HF YGE+
Sbjct: 4 TDNKINGNAS----ETIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQA 58
Query: 302 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHG-KIFVGGLS 478
VK D GRSRGFAF+ F E +AA E TI K V+ K AK+R K+FVGGL
Sbjct: 59 QVKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLP 118
Query: 479 SEISDDEIRNFFSEFGTI 532
S+ S+ ++R+ F +FG +
Sbjct: 119 SDYSEQDLRSHFEQFGKV 136
Score = 68.1 bits (159), Expect = 4e-12
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
+++K+FVGGL + ++++LR HF +G+++ I D T R FAFIVF+ ES DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 386 MAAGEHTINNKKVDPKKAKARHGKIFVG 469
+ + T ++ D KKA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 109 bits (261), Expect = 2e-24
Identities = 50/121 (41%), Positives = 75/121 (61%), Gaps = 9/121 (7%)
Frame = +2
Query: 197 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 376
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 377 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 529
DKV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 530 I 532
+
Sbjct: 160 V 160
Score = 66.5 bits (155), Expect = 1e-11
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 391
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 392 AGEHTINNKKVDPKKAKAR 448
H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
Score = 33.5 bits (73), Expect = 0.099
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 398 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 532
E +N D GK+F+GGLS + + + +R++F FG +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEV 71
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 109 bits (261), Expect = 2e-24
Identities = 50/121 (41%), Positives = 75/121 (61%), Gaps = 9/121 (7%)
Frame = +2
Query: 197 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 376
G D K+F+GGLSW+TT + LRD+FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 377 DKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEFGT 529
DKV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 530 I 532
+
Sbjct: 160 V 160
Score = 66.5 bits (155), Expect = 1e-11
Identities = 31/79 (39%), Positives = 48/79 (60%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 391
+K+F+GGLS +T ++++ +F YG++E + D T R RGF F+ F + E DKV
Sbjct: 134 KKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCE 193
Query: 392 AGEHTINNKKVDPKKAKAR 448
H IN K V+ KKA+ +
Sbjct: 194 IHFHEINGKMVECKKAQPK 212
Score = 33.5 bits (73), Expect = 0.099
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 398 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 532
E +N D GK+F+GGLS + + + +R++F FG +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEV 71
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 91.5 bits (217), Expect = 4e-19
Identities = 52/140 (37%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Frame = +2
Query: 146 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 325
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 326 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGG 472
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 473 LSSEISDDEIRNFFSEFGTI 532
+ + ++D + +F+++GT+
Sbjct: 121 VREDHTEDMLTEYFTKYGTV 140
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 391
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 392 AGEHTINNKKVDPKKAKAR 448
H +N + D +K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 91.5 bits (217), Expect = 4e-19
Identities = 52/140 (37%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Frame = +2
Query: 146 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 325
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 326 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGG 472
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 473 LSSEISDDEIRNFFSEFGTI 532
+ + ++D + +F+++GT+
Sbjct: 121 VREDHTEDMLTEYFTKYGTV 140
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 391
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 392 AGEHTINNKKVDPKKAKAR 448
H +N + D +K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 91.5 bits (217), Expect = 4e-19
Identities = 52/140 (37%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
Frame = +2
Query: 146 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 325
AENG GD+ S E ++ RK+FVGGL+ TTD +R+ + +GEI I V DP T
Sbjct: 8 AENGSGDA----SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60
Query: 326 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGG 472
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G
Sbjct: 61 KRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSG 120
Query: 473 LSSEISDDEIRNFFSEFGTI 532
+ + ++D + +F+++GT+
Sbjct: 121 VREDHTEDMLTEYFTKYGTV 140
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 391
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 392 AGEHTINNKKVDPKKAKAR 448
H +N + D +K ++
Sbjct: 174 QKSHMVNGHRCDVRKGLSK 192
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 70.5 bits (165), Expect = 7e-13
Identities = 34/79 (43%), Positives = 47/79 (59%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 391
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 392 AGEHTINNKKVDPKKAKAR 448
H + K VD K+A R
Sbjct: 109 DRPHKLGGKTVDSKRAIPR 127
Score = 35.5 bits (78), Expect = 0.024
Identities = 11/27 (40%), Positives = 23/27 (85%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTIL 535
K+F+GGLS + +D+++ N+FS++G ++
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVV 76
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 70.5 bits (165), Expect = 7e-13
Identities = 34/79 (43%), Positives = 47/79 (59%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 391
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 392 AGEHTINNKKVDPKKAKAR 448
H + K VD K+A R
Sbjct: 129 DRPHKLGGKTVDSKRAIPR 147
Score = 35.5 bits (78), Expect = 0.024
Identities = 11/27 (40%), Positives = 23/27 (85%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTIL 535
K+F+GGLS + +D+++ N+FS++G ++
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVV 96
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 70.5 bits (165), Expect = 7e-13
Identities = 34/79 (43%), Positives = 47/79 (59%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 391
RKLF+GGLS +TTD++L ++F +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 392 AGEHTINNKKVDPKKAKAR 448
H + K VD K+A R
Sbjct: 130 DRPHKLGGKTVDSKRAIPR 148
Score = 35.5 bits (78), Expect = 0.024
Identities = 11/27 (40%), Positives = 23/27 (85%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTIL 535
K+F+GGLS + +D+++ N+FS++G ++
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVV 97
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 68.9 bits (161), Expect = 2e-12
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Frame = +2
Query: 260 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 439
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 440 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTI 532
R K ++V G+ + ++D + +F+++GT+
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 102
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 391
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 392 AGEHTINNKKVDPKKAKAR 448
H +N + D +K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 68.9 bits (161), Expect = 2e-12
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Frame = +2
Query: 260 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 439
+R+ + +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 440 KARHGK-----------IFVGGLSSEISDDEIRNFFSEFGTI 532
R K ++V G+ + ++D + +F+++GT+
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTV 102
Score = 51.2 bits (117), Expect = 5e-07
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 391
++L+V G+ + T+ L ++F YG + + D T + RGF F+ F +S+D+ +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 392 AGEHTINNKKVDPKKAKAR 448
H +N + D +K ++
Sbjct: 136 QKSHMVNGHRCDVRKGLSK 154
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 59.3 bits (137), Expect = 2e-09
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Frame = +2
Query: 167 SQDHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 340
+Q N+ G D K+FVGGL + T+DK L ++F +G+IE V TD NT +SRG
Sbjct: 18 AQSTNAEPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRG 77
Query: 341 FAFIVFKAPESIDKVMAAGEHTINNKKVD 427
+ F+ K S ++ I+ +K +
Sbjct: 78 YGFVTMKDRASAERACKDPNPIIDGRKAN 106
Score = 31.1 bits (67), Expect = 0.53
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
KIFVGGL SD + +F +FG I
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDI 61
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 58.0 bits (134), Expect = 4e-09
Identities = 26/80 (32%), Positives = 45/80 (56%)
Frame = +2
Query: 188 EAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 367
EA ++ + +++ + W T +L +F YG I+S+N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 368 ESIDKVMAAGEHTINNKKVD 427
+ +K + H I+ +VD
Sbjct: 77 DGANKAIEQRPHVIDGDRVD 96
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 58.0 bits (134), Expect = 4e-09
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +2
Query: 182 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK 361
+AE + D R ++VG + W++T E+ +HF G++ + + D TG + FAF+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 362 APESIDKVMAAGEHTINNKKV 424
ES+ + N+K+
Sbjct: 96 KLESVQLALVLSGTMFRNRKI 116
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 56.4 bits (130), Expect = 1e-08
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Frame = +2
Query: 134 LNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKT 313
+N N + SQ + E D + ++VG + + T +E+ HF G + + ++
Sbjct: 52 MNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQC 111
Query: 314 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNK--KVDPKK 436
D +G +GFA++ F E + +A + + + KVDPK+
Sbjct: 112 DRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGRQIKVDPKR 154
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 56.0 bits (129), Expect = 2e-08
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Frame = +2
Query: 101 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 271
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 272 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 451
F +G++E +++KT NT +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 244
Query: 452 GK------IFVGGLSSEISDDEIRNFFSEFGTI 532
GK +FVGGL S + ++ F EFG +
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFV 277
Score = 30.3 bits (65), Expect = 0.92
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 212 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 304
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 56.0 bits (129), Expect = 2e-08
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Frame = +2
Query: 101 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 271
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 129 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 188
Query: 272 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 451
F +G++E +++KT NT +AF++F+ + + A E + + K +
Sbjct: 189 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 244
Query: 452 GK------IFVGGLSSEISDDEIRNFFSEFGTI 532
GK +FVGGL S + ++ F EFG +
Sbjct: 245 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFV 277
Score = 30.3 bits (65), Expect = 0.92
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 212 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 304
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 251 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 56.0 bits (129), Expect = 2e-08
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Frame = +2
Query: 101 NFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD---RKLFVGGLSWETTDKELRDH 271
N AQ + G+ G S +DDD R LFVG + + ++E+R
Sbjct: 106 NRAQHGADSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHV 165
Query: 272 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 451
F +G++E +++KT NT +AF++F+ + + A E + + K +
Sbjct: 166 FEEHGKVEEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGY 221
Query: 452 GK------IFVGGLSSEISDDEIRNFFSEFGTI 532
GK +FVGGL S + ++ F EFG +
Sbjct: 222 GKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFV 254
Score = 30.3 bits (65), Expect = 0.92
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 2/33 (6%)
Frame = +2
Query: 212 RKLFVGGL-SWETTDKE-LRDHFGAYGEIESIN 304
R+LFVGGL SW DKE L+ FG +G +E+I+
Sbjct: 228 RRLFVGGLGSW--CDKEILQKAFGEFGFVENID 258
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 54.8 bits (126), Expect = 4e-08
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +2
Query: 173 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 346
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 347 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 499
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 500 IRNFFSEFGTI 532
+R F++FG I
Sbjct: 158 LREIFAKFGHI 168
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 54.8 bits (126), Expect = 4e-08
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +2
Query: 173 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 346
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 347 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 499
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 500 IRNFFSEFGTI 532
+R F++FG I
Sbjct: 158 LREIFAKFGHI 168
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 54.8 bits (126), Expect = 4e-08
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +2
Query: 173 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 346
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 347 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 499
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 500 IRNFFSEFGTI 532
+R F++FG I
Sbjct: 158 LREIFAKFGHI 168
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 54.8 bits (126), Expect = 4e-08
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +2
Query: 173 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 346
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 347 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 499
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 500 IRNFFSEFGTI 532
+R F++FG I
Sbjct: 158 LREIFAKFGHI 168
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 54.8 bits (126), Expect = 4e-08
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +2
Query: 173 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 346
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 347 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 499
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 500 IRNFFSEFGTI 532
+R F++FG I
Sbjct: 158 LREIFAKFGHI 168
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 54.8 bits (126), Expect = 4e-08
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +2
Query: 173 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 346
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 347 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 499
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 500 IRNFFSEFGTI 532
+R F++FG I
Sbjct: 158 LREIFAKFGHI 168
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 340
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 54.8 bits (126), Expect = 4e-08
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Frame = +2
Query: 173 DHNSAEAPGRDDDR--KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFA 346
D++ + +P D K+FVG + + + + R F YG + S N+ D +T S+G
Sbjct: 40 DNDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCC 99
Query: 347 FIVF-KAPESID--------KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDE 499
F+ F ++I+ KV+ H + K D + R K+F+G LS + +++
Sbjct: 100 FVTFYHRKDAIEAQGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEEN 157
Query: 500 IRNFFSEFGTI 532
+R F++FG I
Sbjct: 158 LREIFAKFGHI 168
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
++RKLF+G LS + ++ LR+ F +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/105 (27%), Positives = 55/105 (52%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
D +++GGLS+ ++ ++ F YGE+ +IN+ D +TG+S+GFAF+ +K S +
Sbjct: 36 DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRS--TI 93
Query: 386 MAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSE 520
+A N + + + H + + E +DDE + + E
Sbjct: 94 LAV--DNFNGISLHKRMIRVDHVEEYKVPKYKEDADDETKRLWEE 136
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +2
Query: 458 IFVGGLSSEISDDEIRNFFSEFGTIL 535
I++GGLS +S+ ++ FS++G ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVM 65
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/77 (37%), Positives = 38/77 (49%)
Frame = +2
Query: 140 GNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDP 319
G GGG + + + L V LS TT+K+LRD FG +GEI ++ D
Sbjct: 52 GGGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDR 111
Query: 320 NTGRSRGFAFIVFKAPE 370
+G SRGF FI F E
Sbjct: 112 PSGNSRGFGFIYFNLIE 128
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 52.0 bits (119), Expect = 3e-07
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Frame = +2
Query: 200 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 379
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 380 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTIL 535
+ + K + KA A IFVG L E+ + + + FS FG IL
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 127
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 182 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 358
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 359 KAPESIDKVMAA 394
+ E+ D + A
Sbjct: 150 ASFEASDTALEA 161
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 52.0 bits (119), Expect = 3e-07
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 7/119 (5%)
Frame = +2
Query: 200 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 379
R+ D ++VGGL + ++ L + G + S+N+ D T +GF F+ F E D
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 380 -KVMAAGEHTINNKKVDPKKAKARH------GKIFVGGLSSEISDDEIRNFFSEFGTIL 535
+ + K + KA A IFVG L E+ + + + FS FG IL
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVIL 137
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +2
Query: 182 SAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI-NVKTDPNTGRSRGFAFIVF 358
SA D +FVG L E +K L D F A+G I + + D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 359 KAPESIDKVMAA 394
+ E+ D + A
Sbjct: 160 ASFEASDTALEA 171
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 51.2 bits (117), Expect = 5e-07
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Frame = +2
Query: 194 PGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF---- 358
P +D D KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 359 ------------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 502
K +++ M +++ PK K K+F+G LS + S+DE+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEV 140
Query: 503 RNFFSEFGTI 532
R F+ FG +
Sbjct: 141 RALFATFGEL 150
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 173 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 352
D A + DD+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 353 VFK 361
+K
Sbjct: 170 KYK 172
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 51.2 bits (117), Expect = 5e-07
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 13/127 (10%)
Frame = +2
Query: 191 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGR-SRGFAFIVFKAP 367
APG +D R +FV L + TT+ E+R A + SI N+ RGFA++V +
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642
Query: 368 ESIDKVMAAGEHTINNKKV-----DPKK-------AKARHGKIFVGGLSSEISDDEIRNF 511
+ + + + + + DP+K K+FV + + +DDE++
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKAL 702
Query: 512 FSEFGTI 532
FS+FGT+
Sbjct: 703 FSKFGTV 709
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 51.2 bits (117), Expect = 5e-07
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Frame = +2
Query: 194 PGRDDDR-KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF---- 358
P +D D KLFVG + +K+LR F +G+I + D TG +G AF+ +
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 359 ------------KAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 502
K +++ M +++ PK K K+F+G LS + S+DE+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEV 140
Query: 503 RNFFSEFGTI 532
R F+ FG +
Sbjct: 141 RALFATFGEL 150
Score = 45.6 bits (103), Expect = 2e-05
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +2
Query: 173 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 352
D A + DD+KLF+G LS + ++ E+R F +GE++ + V + G S+G AF+
Sbjct: 111 DSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
Query: 353 VFK 361
+K
Sbjct: 170 KYK 172
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 50.8 bits (116), Expect = 6e-07
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +2
Query: 179 NSAEAPGRDDD--RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 352
N AE P +D R LFVG +++ET++ +LR F AYG+I+ + + D G+ RG+AFI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 353 VF 358
+
Sbjct: 150 EY 151
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 50.8 bits (116), Expect = 6e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 373
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 391
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 50.8 bits (116), Expect = 6e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 373
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 391
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 50.8 bits (116), Expect = 6e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 373
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ PE+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEA 155
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRS-RGFAFIVFKAPESIDKVMA 391
+++V + + ++ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 50.4 bits (115), Expect = 8e-07
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 209 DRKLFVGGLSWETTDKELRDHFGAY-GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
D +FVG L +E T+ L F A G +E++ + D +TG+ +GFAF+ FK S+
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS-- 302
Query: 386 MAAGEHTINNKKVDPKKAK 442
+A TI +K D + K
Sbjct: 303 LALSMETIKMEKRDLRITK 321
Score = 37.5 bits (83), Expect = 0.006
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 23/136 (16%)
Frame = +2
Query: 179 NSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVK---------------- 310
++A A ++ +FVG + +K +R F +G I S+ ++
Sbjct: 132 SNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVTHL 191
Query: 311 TDPNTGRSRGFAFIV-FKAPESIDKVMAAG-----EHTINNKKVDPKKAK-ARHGKIFVG 469
T + F V F A ES++K + +H I KV KK + + IFVG
Sbjct: 192 TGKLNDKQSSLTFYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIFVG 251
Query: 470 GLSSEISDDEIRNFFS 517
L EI++D + FFS
Sbjct: 252 NLPFEITEDALITFFS 267
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 458 IFVGGLSSEISDDEIRNFFSEFGTI 532
+FVG + +++ +R FS+FGTI
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTI 169
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 50.4 bits (115), Expect = 8e-07
Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Frame = +2
Query: 131 QLNGNAENGGGDSQDHNSAEAPGRDDDRK---LFVGGLSWETTDKELRDHFGAYGEIESI 301
++ + ++ D +D S + D + L V G+ ++TTD+ + +F G +
Sbjct: 143 KVGSSDDSDSDDGRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFC 202
Query: 302 NVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH-------GKI 460
+K + G S+GF F+ + +KV+A +H I+ ++ D K R +I
Sbjct: 203 EIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRI 261
Query: 461 FVGGLSSEISDDEIRNFFSE 520
FVG L+ ++ + ++R F +
Sbjct: 262 FVGRLTDKVDEHQLRKVFGD 281
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +2
Query: 197 GRDDDRKLFVGGLSWETTDKELRDHFG--AYGEIESINVKTDPNTGRS-RGFAFIVFKAP 367
GR ++FVG L+ + + +LR FG A IE+ V TD + RGFAF+ +
Sbjct: 254 GRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETA-VVTDVFIPKPFRGFAFVTLSSA 312
Query: 368 ESIDKVMAAGEHTINNKKVDPKKAKAR 448
E+ +++++ G T+N V A+ R
Sbjct: 313 EAAERIVSKGSLTVNGLSVGLSIAQPR 339
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 370
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 45.6 bits (103), Expect = 2e-05
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 394
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 395 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 535
I+ + + DP +A +G IF+ L I + + + FS FG IL
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNIL 172
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Frame = +2
Query: 191 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 370
A R + +F+ L +K + D F +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 371 S----IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRN 508
S I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 509 FFSEFGTI 532
FS+FG I
Sbjct: 257 MFSKFGEI 264
Score = 31.9 bits (69), Expect = 0.30
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 26/131 (19%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 376
+FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 377 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 499
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 500 IRNFFSEFGTI 532
+R+ FS FGTI
Sbjct: 359 LRDHFSSFGTI 369
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/51 (45%), Positives = 31/51 (60%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 370
L+V + + D LRDHF ++G I S V D N GRS+GF F+ F+ PE
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPE 394
Score = 45.6 bits (103), Expect = 2e-05
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 394
L++G L + ++ L + F G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 395 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 535
I+ + + DP +A +G IF+ L I + + + FS FG IL
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNIL 172
Score = 39.9 bits (89), Expect = 0.001
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Frame = +2
Query: 191 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 370
A R + +F+ L +K + D F +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 371 S----IDKV--MAAGEHTINNKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIRN 508
S I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 509 FFSEFGTI 532
FS+FG I
Sbjct: 257 MFSKFGEI 264
Score = 31.9 bits (69), Expect = 0.30
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 26/131 (19%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-------KAPESI 376
+FV ++L F +GEI S V TD G+ +GF F+ F +A E +
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 377 -DKVMAAGEHTINNKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 499
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 500 IRNFFSEFGTI 532
+R+ FS FGTI
Sbjct: 359 LRDHFSSFGTI 369
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
++VG ++TT++EL + F + G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 48.4 bits (110), Expect = 3e-06
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 394
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 395 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 535
++ K + DP ++ G IF+ L I + I + FS FG IL
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 173 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 352
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 353 VFKAPE 370
F+ PE
Sbjct: 363 CFEKPE 368
Score = 30.3 bits (65), Expect = 0.92
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 272 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 48.4 bits (110), Expect = 3e-06
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM-AA 394
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 395 GEHTINNKKV-------DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 535
++ K + DP ++ G IF+ L I + I + FS FG IL
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 147
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 173 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 352
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 353 VFKAPE 370
F+ PE
Sbjct: 363 CFEKPE 368
Score = 30.3 bits (65), Expect = 0.92
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 272 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 271
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 46.8 bits (106), Expect = 1e-05
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
++VG + ++ T++E+ ++F A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 173 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 352
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302
Query: 353 VFKAPE 370
F+ PE
Sbjct: 303 CFEKPE 308
Score = 36.3 bits (80), Expect = 0.014
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
L+VG L + + L + F A G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 30.3 bits (65), Expect = 0.92
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 272 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 211
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 1e-05
Identities = 25/66 (37%), Positives = 34/66 (51%)
Frame = +2
Query: 173 DHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI 352
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299
Query: 353 VFKAPE 370
F+ PE
Sbjct: 300 CFEKPE 305
Score = 30.3 bits (65), Expect = 0.92
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 272 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
F +G I S V T G+S+GF F+ F PE + + A
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQA 208
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 425 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 535
DP ++ G IF+ L I + I + FS FG IL
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNIL 84
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF-KAPESIDKVMAA 394
L + L T +E+R F + GEIES + D TG+S G+ F+ + + +++ V +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 395 GEHTINNKKVD-----PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 535
+ NK + P + + ++V G+ ++ E+ + F FG I+
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQII 155
Score = 33.5 bits (73), Expect = 0.099
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 379
L+V G+ T EL F +G+I + + +D TG S+G F+ F + D
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 45.6 bits (103), Expect = 2e-05
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Frame = +2
Query: 197 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF------ 358
G D+ R L+VG L T+ + F G + V D G + +AF+ F
Sbjct: 41 GSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQA 97
Query: 359 -KAPESIDKVMAAGEHTINNKKVDPKKAKA-----RHGKIFVGGLSSEISDDEIRNFFSE 520
+A ++++K + N V+P + ++ RH +FVG LSSE+ + ++R F
Sbjct: 98 SQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP 157
Query: 521 FGTI 532
FG +
Sbjct: 158 FGDV 161
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 26/131 (19%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 391
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 392 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 499
G TI N K D + + ++VG ++S +++DE
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 255
Query: 500 IRNFFSEFGTI 532
IR F+ FG I
Sbjct: 256 IRQGFASFGRI 266
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
++VG ++TT+ +L ++F G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 45.2 bits (102), Expect = 3e-05
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 27/146 (18%)
Frame = +2
Query: 176 HNSAEAPG--RDDDRK---LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 340
H+++E P R D K +FVG LS + +++ L+ F +GE+ V D T +S+G
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 341 FAFIVFKAPESIDKVMAA------GEHTI--------NNKKVDPK--------KAKARHG 454
+ F+ F ++ + +A G+ + N+++ K KA +
Sbjct: 178 YGFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNT 237
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
++VG +S + +D ++R+ FS +G I
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDI 263
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
D+ ++VG +S +TTD +LRD F YG+I + + +++ +AF+ ++ E K
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECATKA 288
Query: 386 M 388
+
Sbjct: 289 I 289
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 26/131 (19%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 391
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 392 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 499
G TI N K D + + ++VG ++S +++DE
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 142
Query: 500 IRNFFSEFGTI 532
IR F+ FG I
Sbjct: 143 IRQGFASFGRI 153
Score = 33.5 bits (73), Expect = 0.099
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 446 RHGKIFVGGLSSEISDDEIRNFFSEFGTI 532
RH +FVG LSSE+ + ++R F FG +
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDV 48
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 26/131 (19%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 391
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 392 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 499
G TI N K D + + ++VG ++S +++DE
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 152
Query: 500 IRNFFSEFGTI 532
IR F+ FG I
Sbjct: 153 IRQGFASFGRI 163
Score = 33.5 bits (73), Expect = 0.099
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 446 RHGKIFVGGLSSEISDDEIRNFFSEFGTI 532
RH +FVG LSSE+ + ++R F FG +
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDV 58
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 45.2 bits (102), Expect = 3e-05
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 26/131 (19%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA-- 391
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + E ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 392 ----AGEHTI------------------NNKKVDP--KKAKARHGKIFVGGLSSEISDDE 499
G TI N K D + + ++VG ++S +++DE
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223
Query: 500 IRNFFSEFGTI 532
IR F+ FG I
Sbjct: 224 IRQGFASFGRI 234
Score = 33.5 bits (73), Expect = 0.099
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 446 RHGKIFVGGLSSEISDDEIRNFFSEFGTI 532
RH +FVG LSSE+ + ++R F FG +
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDV 129
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/97 (24%), Positives = 52/97 (53%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 122
Query: 395 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 505
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 123 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/97 (24%), Positives = 52/97 (53%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
++FVGG TT+ ELR+HF + ++ + + + G+S+G+ FI F+ + +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 123
Query: 395 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 505
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 124 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APES 373
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 374 IDKVMAAGEHTINNKKV 424
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMA 391
R L+VGG + + T+K L F +G++ +I++ D +G+ RGF F+ F E D MA
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAE--DAAMA 68
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 44.4 bits (100), Expect = 5e-05
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +2
Query: 197 GRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFK-APES 373
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ ++
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 374 IDKVMAAGEHTINNKKV 424
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 376
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 191 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 370
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ +
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 371 SIDK 382
K
Sbjct: 179 DAQK 182
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 44.4 bits (100), Expect = 5e-05
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 376
D R L + ++ +T ++L + F A G + + + TD TGRS+G ++ F ES+
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 191 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 370
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ +
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 371 SIDK 382
K
Sbjct: 324 DAQK 327
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 200 RDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 379
R D+ V L E + ELRD FG G + I + D TG +GFAF+ F++ +
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 380 KVMA 391
+ +A
Sbjct: 232 RAIA 235
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 373
+LF+ L + T + +L+ F YGE+ + V D TG +GFA + F PE+
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEA 332
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/69 (33%), Positives = 33/69 (47%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
+L V L T+++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 395 GEHTINNKK 421
T N K
Sbjct: 63 SNQTFFNSK 71
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +2
Query: 146 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 325
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 326 GRSRGFAFIVF 358
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +2
Query: 146 AENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNT 325
+ GGGD + AP + L + LS++TT +LR F YG+I +++ D +
Sbjct: 2 SRGGGGDRR-----AAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYS 56
Query: 326 GRSRGFAFIVF 358
+S+GF F+ F
Sbjct: 57 RQSKGFGFVRF 67
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
D + +F+G + + +T +E+ +HF G+I + D T + + FA+I F SI+
Sbjct: 53 DAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
Query: 386 M 388
+
Sbjct: 113 L 113
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 197 GRD-DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 358
G D R +FVG +S++ ++ +R F G + SI + D TG+ +G+ FI F
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
Score = 32.7 bits (71), Expect = 0.17
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +2
Query: 458 IFVGGLSSEISDDEIRNFFSEFGTIL 535
+FVG +S ++S+D IR+ FS+ G +L
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVL 45
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.5 bits (93), Expect = 4e-04
Identities = 24/92 (26%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Frame = +2
Query: 164 DSQDHNSAEAPGRDDDRKL-FVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRG 340
D + ++ AP R + + FV + E T+ ++ D F YG+I++I++ D TG +G
Sbjct: 38 DEESSATSGAPQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKG 97
Query: 341 FAFIVFKAPESIDKVMAAGEHTI---NNKKVD 427
+A + ++ + ++ + T N KVD
Sbjct: 98 YALVEYETQKEANEAIDQSNDTDLLGQNVKVD 129
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 194 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 373
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 374 IDKVMAA-GEHTINNKKVDPKKAKARHGKI 460
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 41.5 bits (93), Expect = 4e-04
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 1/116 (0%)
Frame = +2
Query: 158 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 337
GG D +++VG + + + L F G+I + + DP +G SR
Sbjct: 182 GGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASR 241
Query: 338 GFAFIVFKAPESIDKVMAAGE-HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 502
G+AF+ + E + H I+ K + ++F+G + S DEI
Sbjct: 242 GYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEI 297
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 194 PGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 373
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + ES
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 374 IDKVMAA-GEHTINNKKVDPKKAKARHGKI 460
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 230 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 409
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 410 NNKKVD 427
++ ++
Sbjct: 68 GSRYIE 73
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/66 (33%), Positives = 35/66 (53%)
Frame = +2
Query: 230 GLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTI 409
GL WE T++ELRD FG G IES+ + GR+ G A +VF E + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 410 NNKKVD 427
++ ++
Sbjct: 68 GSRYIE 73
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 40.7 bits (91), Expect = 6e-04
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
D + +F+G + + +T +E+ +HF G I + D T + + FA+I F SI+
Sbjct: 59 DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
Query: 386 M 388
+
Sbjct: 119 L 119
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + E ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
Score = 34.7 bits (76), Expect = 0.043
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 15/129 (11%)
Frame = +2
Query: 191 APGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 370
A G +D R LFV L TD+ L F G + + + G + +AF+ F
Sbjct: 33 ASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHN 89
Query: 371 SIDKVMAA--GEHTINNKK-----VDP--------KKAKARHGKIFVGGLSSEISDDEIR 505
+ + G + + +P K +RH +FVG L SEI ++R
Sbjct: 90 QATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLR 149
Query: 506 NFFSEFGTI 532
F +FG +
Sbjct: 150 EAFVKFGEV 158
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 401 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 532
H + K D +A A + ++VG +++ + +DEIR F FG I
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPI 281
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 203 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 382
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 383 VMA 391
+A
Sbjct: 347 AIA 349
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
KIF+GGL + +++D+++ FG +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPL 317
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 203 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 382
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 383 VMA 391
+A
Sbjct: 347 AIA 349
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
KIF+GGL + +++D+++ FG +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPL 317
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 203 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 382
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 321
Query: 383 VMA 391
+A
Sbjct: 322 AIA 324
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
KIF+GGL + +++D+++ FG +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPL 292
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = +2
Query: 203 DDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 382
D K+F+GGL T+ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 324
Query: 383 VMA 391
+A
Sbjct: 325 AIA 327
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
KIF+GGL + +++D+++ FG +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPL 295
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 38.7 bits (86), Expect = 0.003
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 11/131 (8%)
Frame = +2
Query: 137 NGNAENGGG-DSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI---- 301
+G+A +GG D D + A DDRK+ V +S + T +L+ F YG+I S
Sbjct: 86 DGDAFDGGETDDFDASIAFQHTSRDDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
Query: 302 -NVKTD-----PNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIF 463
KT P R+ G A I FK E D+ A + K D + +
Sbjct: 146 EEKKTSVFGTLPKHSRNCGTATITFKKSEHADRAKNANPEEL--KFYDQVMVVSAYVSKK 203
Query: 464 VGGLSSEISDD 496
GG +SDD
Sbjct: 204 RGGKGLVLSDD 214
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = +2
Query: 269 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 448
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 449 HGKIFVGGLSSEISDDEIRNFFSEFGTI 532
K+FVGG+S ++ I FF +FGT+
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTV 231
Score = 37.9 bits (84), Expect = 0.005
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPES 373
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 374 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 472
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 473 LSSEISDDEIRNFFSEFGTIL 535
L ++ +EI FSEFG +L
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVL 346
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = +2
Query: 269 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 448
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 449 HGKIFVGGLSSEISDDEIRNFFSEFGTI 532
K+FVGG+S ++ I FF +FGT+
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTV 231
Score = 37.9 bits (84), Expect = 0.005
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPES 373
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 374 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 472
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 473 LSSEISDDEIRNFFSEFGTIL 535
L ++ +EI FSEFG +L
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVL 346
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/88 (23%), Positives = 38/88 (43%)
Frame = +2
Query: 269 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 448
HFG++ + + N + R K+ + + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 449 HGKIFVGGLSSEISDDEIRNFFSEFGTI 532
K+FVGG+S ++ I FF +FGT+
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTV 231
Score = 37.9 bits (84), Expect = 0.005
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEI-ESINVKTDPNT-GRS-----RGFAFIVFKAPES 373
K+FVGG+S K + FG +G + VK PN+ G+S + F+V+ +S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 374 IDKVMAAGEHTINNK------------KVDPK--------KAKARHGKI-------FVGG 472
+ K+M+A N ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 473 LSSEISDDEIRNFFSEFGTIL 535
L ++ +EI FSEFG +L
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVL 346
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 37.1 bits (82), Expect = 0.008
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 209 DRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 388
+R L++ L ++ T +E+ + FG +G + I V NT +RG AF+V+ E I
Sbjct: 18 NRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVY---EDIFDAK 71
Query: 389 AAGEH 403
A EH
Sbjct: 72 TACEH 76
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 37.1 bits (82), Expect = 0.008
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYG 286
RK+FVGG+ W+ T+ L+D FG +G
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFG 319
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGT 529
KIFVGG+ +I++ +++ F EFG+
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS 320
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 36.7 bits (81), Expect = 0.011
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +2
Query: 203 DDDRKLFVGGLSWETTDKEL-RDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 379
D R +F+GG+ T ++L R G YG++ + + DP +G A + F ++
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFV 421
Query: 380 KVMAAG----EHTINNKKVDPK 433
+ ++ H NNK+V+ K
Sbjct: 422 RAISGRFVQVNHAENNKRVEIK 443
Score = 31.1 bits (67), Expect = 0.53
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 383 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL 535
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/27 (37%), Positives = 21/27 (77%)
Frame = +2
Query: 212 RKLFVGGLSWETTDKELRDHFGAYGEI 292
RK+F+GGL + +++++ FGA+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 35.5 bits (78), Expect = 0.024
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 218 LFVGGL----SWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV 385
L++G L + + T+K+L D F YG+I + V T+ +G AFI F E+ ++
Sbjct: 237 LYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTREAAER- 289
Query: 386 MAAGEHTINNKKVDPKKAKARHGK 457
A E + N + K+ R G+
Sbjct: 290 --AAERSFNKTFIKGKRLTIRWGE 311
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.032
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 382
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 35.1 bits (77), Expect = 0.032
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 382
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 35.1 bits (77), Expect = 0.032
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 382
LFV L+ TTD++L F +G+I + + D +G S +AFI F +S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 34.7 bits (76), Expect = 0.043
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 158 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 337
G + + S + D R+L V + ++ + +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 338 GFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 457
GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 140 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 34.7 bits (76), Expect = 0.043
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +2
Query: 158 GGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSR 337
G + + S + D R+L V + ++ + +L F G + ++V+ N S+
Sbjct: 82 GPVAPNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSK 139
Query: 338 GFAFIVFKAPESIDKVMAA-GEHTINNKKVDPKKAKAR-HGK 457
GF F+ + P+ D+ A TI ++V+ A R H K
Sbjct: 140 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 33.9 bits (74), Expect = 0.075
Identities = 13/54 (24%), Positives = 32/54 (59%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAP 367
+ + +F+ LS++T ++ +++ +G+I+ + ++G S+G AF+ F P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 33.9 bits (74), Expect = 0.075
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
K+FVGGL S + + +I NFFS +G +
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGRL 114
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 33.9 bits (74), Expect = 0.075
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Frame = +2
Query: 140 GNAENGGGDSQDHNSAEAPGRDDDRK--LFVGGLSWETTDKELRDHFGAYGEIESINVKT 313
G + NG ++ E P + + LFVG L E + EL++ F +G+I +
Sbjct: 90 GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS- 148
Query: 314 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISD 493
+GFAF+ + A + I + + + I V LS +S+
Sbjct: 149 ------GKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSN 202
Query: 494 DEIRNFFSEFGTI 532
+ + + FS FG +
Sbjct: 203 EMLYHAFSHFGDV 215
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.075
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Frame = +2
Query: 140 GNAENGGGDSQDHNSAEAPGRDDDRK--LFVGGLSWETTDKELRDHFGAYGEIESINVKT 313
G + NG ++ E P + + LFVG L E + EL++ F +G+I +
Sbjct: 90 GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLS- 148
Query: 314 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISD 493
+GFAF+ + A + I + + + I V LS +S+
Sbjct: 149 ------GKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSN 202
Query: 494 DEIRNFFSEFGTI 532
+ + + FS FG +
Sbjct: 203 EMLYHAFSHFGDV 215
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 33.5 bits (73), Expect = 0.099
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +2
Query: 218 LFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAG 397
L+VG LS+ T + ++ + FG G++ + + D GF F+ + E + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 398 EHTINNKKVDPKKAKARHGKIFVGG 472
I+N ++D + +A F+ G
Sbjct: 96 -QNISNTRMDDRVIRADWDAGFIEG 119
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 449 HGKIFVGGLSSEISDDEIRNFFSEFGTIL 535
H +F+GGL ++ +EI FSEFG +L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVL 132
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +2
Query: 206 DDRKLFVGGLSWETTDKEL-RDHFGAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 361
++R+++VG + ++ T+KEL D Y IE++ +K+ R GFAF+ FK
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 32.3 bits (70), Expect = 0.23
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Frame = +2
Query: 206 DDRKLFVGGLSWETT-------DKELRDHFGAYGEIESI----NVKTDPNTGRSRGFAFI 352
++RK+++GG++ E + E++ F YGEIE + V PN FAFI
Sbjct: 324 NERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFI 383
Query: 353 VFKAPESIDKVMAA 394
+ + + A
Sbjct: 384 TMRNKAGVKAIFEA 397
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 31.9 bits (69), Expect = 0.30
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 206 DDRKLFVGGLSWET-TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 382
+ ++LFV + T KEL+ +FGAYG+I + +D + G F I F S+D
Sbjct: 29 ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDV 86
Query: 383 VM 388
++
Sbjct: 87 LL 88
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 31.1 bits (67), Expect = 0.53
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 428 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 532
PKK ++FVG L +E+ + E++ FS G I
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDI 142
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +2
Query: 140 GNAENGGGDSQDHNSAEAPGRDDDRK--LFVGGLSWETTDKELRDHFGAYGEI 292
G + NG ++ E P + + LFVG L E + EL++ F +G+I
Sbjct: 90 GTSFNGAAFTESQLMDEVPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDI 142
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 30.3 bits (65), Expect = 0.92
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +2
Query: 122 TDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRDHFGAYGEIESI 301
T+N + N GG + N P +L G + WE K+++D F +YG I+
Sbjct: 41 TENTRQRSNSNAGGSPDEQN----PQFGMQAQL--GKMMWEAGSKQVQDTFQSYGRIDLF 94
Query: 302 N--VKTDPNTGRSRGFAFIVFKAPESI 376
DP R+R + + P I
Sbjct: 95 RPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
K++VGGL S+ + E+ F FG I
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRI 29
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
K++VGGL S+ + E+ F FG I
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRI 29
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
K++VGGL S+ + E+ F FG I
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRI 29
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +2
Query: 221 FVGGLSWETTDKELRDHFGAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPESIDKVM 388
+VG L W TTD +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -3
Query: 307 YINTLYFTVCSKMITELLICGLPAQPTNKKFSVVIASWGLSTVMILRITATVL 149
Y NT TV +K + E + + PT K ++ SW +S V + + T L
Sbjct: 1864 YANTTVGTVAAKFLREAALL-MDTPPTTPKERLLQCSWAMSKVPFINMILTCL 1915
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 217
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 92 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 217
N++N + + +N NG NGG + N E+ G D + +
Sbjct: 1323 NSENVNSETSPENGSNGKLANGGDNLSIKNGIESNGNDGEEE 1364
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 395 GEHTINNKKVDPKKAKARHGKIFVGG 472
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
+I++G L+S +S+ +I +FF +G I
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQI 29
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 395 GEHTINNKKVDPKKAKARHGKIFVGG 472
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
+I++G L+S +S+ +I +FF +G I
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQI 29
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/86 (20%), Positives = 39/86 (45%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
++++G L+ ++K++ F YG+I + +K GF F+ F + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEFDDKRDAEDAV-- 53
Query: 395 GEHTINNKKVDPKKAKARHGKIFVGG 472
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 455 KIFVGGLSSEISDDEIRNFFSEFGTI 532
+I++G L+S +S+ +I +FF +G I
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQI 29
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +2
Query: 215 KLFVGGLSWETTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 394
+LF+ L + +L++ F + +I+ ++ PN S+ AFI F E A
Sbjct: 639 QLFINALPGTCNNTDLKNIFRSSTDIKILHASGQPN---SKKRAFITFGTVEDAQAAFAK 695
Query: 395 GEH-TINNKKVDPKKAKARHGKIFV 466
+NN VD A+ + K+ V
Sbjct: 696 SNGLKVNNHLVDVFYARHQETKVDV 720
>Z69634-9|CAO82013.1| 575|Caenorhabditis elegans Hypothetical
protein B0001.3b protein.
Length = 575
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 113 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
D+ N+ N ++ + GGDS + E DDD
Sbjct: 416 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 448
>Z69634-8|CAA93452.4| 591|Caenorhabditis elegans Hypothetical
protein B0001.3a protein.
Length = 591
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 113 DITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 211
D+ N+ N ++ + GGDS + E DDD
Sbjct: 432 DVAPGNRRNNSSSSAGGDSHLRGTVEFSSSDDD 464
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 332 SRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 451
SRGF IVF A ++++V G H +N+ K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 395 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 532
G+HT + + K +FVG +S + SD+ IR +E G +
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNV 73
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 395 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 532
G+HT + + K +FVG +S + SD+ IR +E G +
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNV 73
>AF099920-4|AAK29844.2| 363|Caenorhabditis elegans Serpentine
receptor, class w protein95 protein.
Length = 363
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 171 CESPPPFSAFPLSWLSVVIS 112
CE P P S F + W++VVI+
Sbjct: 107 CEPPAPLSFFYMYWINVVIN 126
>AF067619-1|AAC17568.2| 368|Caenorhabditis elegans Hypothetical
protein K03E5.3 protein.
Length = 368
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 309 RQIQTQADHEGLPSLCLR 362
+ I+T D EG+PS CLR
Sbjct: 74 KMIRTDRDEEGIPSTCLR 91
>AC024746-7|AAF60403.1| 246|Caenorhabditis elegans Hypothetical
protein Y110A2AL.5 protein.
Length = 246
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -3
Query: 250 CGLPAQPTNKKFSVVIASWGLSTVMILRITATVLCISIKLVVGG 119
C P QP + S+V+ W + + R A CI L + G
Sbjct: 143 CPAPGQPFRRTESLVVCIWTFNETVATREEAKTFCIGKGLKLTG 186
>CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical
protein C52D10.12 protein.
Length = 811
Score = 27.1 bits (57), Expect = 8.6
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -1
Query: 450 CRALAFFGSTFLLLMVCSPAAMTLSIDSGALNTMKANPRDLPV 322
C + F G T L LM +P + L I SGA+ K + LPV
Sbjct: 213 CLSALFSGLT-LGLMSLTPQELELVIKSGAIKEQKCAAKILPV 254
>AF101318-12|AAC69350.2| 400|Caenorhabditis elegans Hypothetical
protein Y73C8C.10 protein.
Length = 400
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 275 GAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 382
G YG I + NV DP S G A I+FK ES ++
Sbjct: 71 GKYGVILTSNVLVDPTNLESAGNA-IIFKEGESHER 105
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +2
Query: 146 AENGGGDSQDHNSAEAPGRDDDR---KLFVG 229
AE GGG+S D +S D+R KLFVG
Sbjct: 603 AELGGGNSNDDDSMSGSNSADEREPYKLFVG 633
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,392,019
Number of Sequences: 27780
Number of extensions: 266008
Number of successful extensions: 1051
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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