Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15e06
(470 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC130398-1|AAI30399.1| 912|Homo sapiens USP29 protein protein. 33 0.38
BC130394-1|AAI30395.1| 912|Homo sapiens USP29 protein protein. 33 0.38
AF229438-1|AAG10401.1| 922|Homo sapiens ubiquitin-specific proc... 33 0.38
Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate 5-... 33 0.50
L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein. 33 0.50
Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental ... 29 8.1
Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental ... 29 8.1
U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein ... 29 8.1
U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase prot... 29 8.1
U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent AT... 29 8.1
U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent AT... 29 8.1
U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent AT... 29 8.1
U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent AT... 29 8.1
U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent AT... 29 8.1
U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent AT... 29 8.1
EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/menta... 29 8.1
AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/menta... 29 8.1
AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/menta... 29 8.1
AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/menta... 29 8.1
AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/menta... 29 8.1
AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulat... 29 8.1
AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein. 29 8.1
>BC130398-1|AAI30399.1| 912|Homo sapiens USP29 protein protein.
Length = 912
Score = 33.5 bits (73), Expect = 0.38
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = -1
Query: 203 LNSVKKVRPLPSTIKLWLKYF---ENKKHNESISSRNNCASKHTFSKRSYVLNLKL 45
+N ++ +PLP +I+ L F E ++N + + +C ++HTFS+ S VL + L
Sbjct: 456 INLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVLIIHL 511
>BC130394-1|AAI30395.1| 912|Homo sapiens USP29 protein protein.
Length = 912
Score = 33.5 bits (73), Expect = 0.38
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = -1
Query: 203 LNSVKKVRPLPSTIKLWLKYF---ENKKHNESISSRNNCASKHTFSKRSYVLNLKL 45
+N ++ +PLP +I+ L F E ++N + + +C ++HTFS+ S VL + L
Sbjct: 456 INLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVLIIHL 511
>AF229438-1|AAG10401.1| 922|Homo sapiens ubiquitin-specific
processing protease protein.
Length = 922
Score = 33.5 bits (73), Expect = 0.38
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = -1
Query: 203 LNSVKKVRPLPSTIKLWLKYF---ENKKHNESISSRNNCASKHTFSKRSYVLNLKL 45
+N ++ +PLP +I+ L F E ++N + + +C ++HTFS+ S VL + L
Sbjct: 456 INLHQETKPLPLSIQNSLDLFFKEEELEYNCQMCKQKSCVARHTFSRLSRVLIIHL 511
>Y14385-1|CAA74743.1| 1258|Homo sapiens inositol polyphosphate
5-phosphatase protein.
Length = 1258
Score = 33.1 bits (72), Expect = 0.50
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 154 QSLIVDGKGLTFFTEF-NKCIVSIKSSFENQANNTDNIHNVK 276
++++ FF EF + C+ K SFEN A ++DNI+ +K
Sbjct: 754 EAIVKTASRTKFFIEFYSTCLEEYKKSFENDAQSSDNINFLK 795
>L36818-1|AAA96658.1| 1149|Homo sapiens 51C protein protein.
Length = 1149
Score = 33.1 bits (72), Expect = 0.50
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 154 QSLIVDGKGLTFFTEF-NKCIVSIKSSFENQANNTDNIHNVK 276
++++ FF EF + C+ K SFEN A ++DNI+ +K
Sbjct: 690 EAIVKTASRTKFFIEFYSTCLEEYKKSFENDAQSSDNINFLK 731
>Z84487-2|CAI42674.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 633 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 691
>Z84487-1|CAI42675.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 595 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 653
>U97103-1|AAC51657.1| 2375|Homo sapiens X-linked nuclear protein
protein.
Length = 2375
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 516 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 574
>U75653-1|AAC51655.1| 2492|Homo sapiens zinc finger helicase
protein.
Length = 2492
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 633 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 691
>U72938-1|AAB49971.2| 2454|Homo sapiens putative DNA dependent
ATPase and helicase protein.
Length = 2454
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 595 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 653
>U72937-1|AAB49970.2| 2492|Homo sapiens putative DNA dependent
ATPase and helicase protein.
Length = 2492
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 633 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 691
>U72936-1|AAB49969.1| 2288|Homo sapiens putative DNA dependent
ATPase and helicase protein.
Length = 2288
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 429 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 487
>U72935-3|AAB40700.1| 2288|Homo sapiens putative DNA dependent
ATPase and helicase protein.
Length = 2288
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 429 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 487
>U72935-2|AAB40699.1| 2337|Homo sapiens putative DNA dependent
ATPase and helicase protein.
Length = 2337
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 478 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 536
>U72935-1|AAB40698.1| 2375|Homo sapiens putative DNA dependent
ATPase and helicase protein.
Length = 2375
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 516 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 574
>EF467914-1|ABO43036.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked protein.
Length = 2492
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 633 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 691
>AL121874-2|CAI40710.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 633 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 691
>AL121874-1|CAB90351.2| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 595 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 653
>AL109753-2|CAI43115.1| 2492|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2492
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 633 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 691
>AL109753-1|CAI43116.1| 2454|Homo sapiens alpha thalassemia/mental
retardation syndrome X-linked (RAD54 homolog, S. cerev
protein.
Length = 2454
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 595 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 653
>AB208928-1|BAD92165.1| 1383|Homo sapiens transcriptional regulator
ATRX isoform 2 variant protein.
Length = 1383
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 598 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 656
>AB102641-1|BAC81110.1| 2492|Homo sapiens ATRX protein.
Length = 2492
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 250 NTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKPANKI 429
N+DN H V+N S+ L + +++ P+ +T T NP + + DE ++ K K+
Sbjct: 633 NSDNEHLVENEVSLLLEESDLRRSPRVKTTPLRRPTETNPVTS-NSDEECNETVKEKQKL 691
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,559,426
Number of Sequences: 237096
Number of extensions: 1288452
Number of successful extensions: 7409
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7409
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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