Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15e06
(470 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-11|AAK72054.1| 224|Caenorhabditis elegans Hypothetical p... 29 1.7
AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical ... 28 2.9
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 28 3.9
AF067942-6|AAG45579.1| 345|Caenorhabditis elegans Hypothetical ... 28 3.9
Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical pr... 27 5.1
U37429-12|AAA79353.1| 274|Caenorhabditis elegans Alkylguanine d... 27 5.1
AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical ... 27 5.1
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ... 27 5.1
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 27 6.8
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 27 6.8
AL032646-12|CAA21685.2| 411|Caenorhabditis elegans Hypothetical... 27 6.8
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 27 6.8
Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z47357-10|CAA87427.3| 426|Caenorhabditis elegans Hypothetical p... 27 9.0
Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical p... 27 9.0
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 27 9.0
D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein. 27 9.0
>U97008-11|AAK72054.1| 224|Caenorhabditis elegans Hypothetical
protein C03G6.5 protein.
Length = 224
Score = 29.1 bits (62), Expect = 1.7
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -1
Query: 212 IHLLNSVKKVRPLPSTIKLWLKYFENKKHN-ESISSRNNCASKHTFSKRSYVLNLKLYCN 36
+ L + +KV L K LK F+ + S S NC +K K YV ++K YC+
Sbjct: 75 VRLSDFAEKVDNLDMNDKTKLKEFKRSCDSLHSCYSNLNCTTKSDDEKDKYVESIKQYCD 134
>AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical
protein C29F9.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 2.9
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +1
Query: 28 AYRLQYSLRFNTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNK 207
AY+ + S+ +D FEN+ + D++ S+ + K + +++ T E
Sbjct: 161 AYKRKKSVITEVFDEFENILWSVCSFSDKLTSIS-CYKKEMDPDCLIENVN-TLSNELEN 218
Query: 208 CIVSIKSSFENQANNTDNIH 267
+ + F NTD IH
Sbjct: 219 -FEKVTAEFTKYLVNTDGIH 237
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 27.9 bits (59), Expect = 3.9
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = -1
Query: 281 MFFTLCMLSVLLA*FSKLLFMETIHLLNSVKKVRPLPSTIK--LW--LKYFENKKHNESI 114
+F+ + +++++ KL E LN+ K + + + IK W L FEN + E I
Sbjct: 8 IFYFIFVIAIIPIVTEKLSLKENKERLNTCGKDKDIYNGIKNNRWHILAAFENGNNIEYI 67
Query: 113 SSRNNCASKHTFSKRSYVLNLKL 45
SS + +++H + +LN ++
Sbjct: 68 SSASLISNRHFITSAFSILNSQM 90
>AF067942-6|AAG45579.1| 345|Caenorhabditis elegans Hypothetical
protein ZK6.4 protein.
Length = 345
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +2
Query: 56 LTRTTASKTCVLKRNCYEMKSI--RCVF 133
+TRTT K C L NC+ I +CVF
Sbjct: 36 ITRTTPVKKCYLGENCFTKTPITQKCVF 63
>Z46241-8|CAA86316.2| 1784|Caenorhabditis elegans Hypothetical protein
C38D4.3 protein.
Length = 1784
Score = 27.5 bits (58), Expect = 5.1
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 73 FENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNKCIVSIKSSFENQANN 252
FEN FEA + E S L S + + DG+G + + +S+K FE + N
Sbjct: 891 FENEKFEA--MSSEAISSNKLLSAFLPGMIKKDGRGRQKTAKEQEIEISVKKMFERKVQN 948
Query: 253 TD 258
D
Sbjct: 949 DD 950
>U37429-12|AAA79353.1| 274|Caenorhabditis elegans Alkylguanine dna
alkyltransferaseprotein 2 protein.
Length = 274
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +1
Query: 268 NVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCK 414
NVK IF+ L+ + + V + Q +++Y+ +DE++ Q K
Sbjct: 50 NVKEIFNCILQTQPLPVVQPCHPVRQPRESFYSSHEHDPMDEVLLQEVK 98
>AF025469-6|AAR12979.1| 813|Caenorhabditis elegans Hypothetical
protein W09B6.1b protein.
Length = 813
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 302 TSSSNKCPNLGPLCNTCKHITIRRRHPT 385
T +++ + +C+T KH+TIR PT
Sbjct: 496 TRGTSRTEAMNTMCSTLKHMTIRSSFPT 523
>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
protein W09B6.1a protein.
Length = 2054
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 302 TSSSNKCPNLGPLCNTCKHITIRRRHPT 385
T +++ + +C+T KH+TIR PT
Sbjct: 496 TRGTSRTEAMNTMCSTLKHMTIRSSFPT 523
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 349 LQTYYNPTPAPDVDEIMCQSCKPANKIQCFECKCRY 456
L T YNP D + C C + I +C C Y
Sbjct: 2060 LPTSYNPDSHDDKLFVPCSGCTSGDVIIIHKCTCAY 2095
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 349 LQTYYNPTPAPDVDEIMCQSCKPANKIQCFECKCRY 456
L T YNP D + C C + I +C C Y
Sbjct: 2060 LPTSYNPDSHDDKLFVPCSGCTSGDVIIIHKCTCAY 2095
>AL032646-12|CAA21685.2| 411|Caenorhabditis elegans Hypothetical
protein Y54E2A.12 protein.
Length = 411
Score = 27.1 bits (57), Expect = 6.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 37 LQYSLRFNTYDRFENVCFEAQLLRDEIDSL 126
L + RFN Y F ++C L+ E+D+L
Sbjct: 184 LSINPRFNYYQGFHDICLTVLLVCGEVDAL 213
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 27.1 bits (57), Expect = 6.8
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 349 LQTYYNPTPAPDVDEIMCQSCKPANKIQCFECKCRY 456
L T YNP D + C C + I +C C Y
Sbjct: 2060 LPTSYNPDSHDDKLFVPCSGCTSGDVIIIHKCTCAY 2095
>Z81484-3|CAB03971.1| 346|Caenorhabditis elegans Hypothetical
protein C47A10.6 protein.
Length = 346
Score = 26.6 bits (56), Expect = 9.0
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = -1
Query: 275 FTLCMLSVLLA*FSKLLFMETIHLLNSVKKVRPLPSTIK-LWLKYFENKKHNESISSRNN 99
FT LS + +S + T H L V PL S + L+L F+ KKH +++S N
Sbjct: 254 FTCFTLSAPVHYYSSEMERPTYHALVEVVNFVPLYSVVMPLYLWVFQ-KKHRDTVS--NT 310
Query: 98 CASKHTFSKRSY--VLNLKL 45
+ T S Y VLN +L
Sbjct: 311 LQASLTTSSDHYFNVLNQQL 330
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +1
Query: 178 GLTFFTEFNKCI---VSIKSSFENQANNTDNI 264
G+TFFT+ NKC V + +S + NNT I
Sbjct: 762 GITFFTKANKCSHCDVRVHASCAPRVNNTCGI 793
>Z47357-10|CAA87427.3| 426|Caenorhabditis elegans Hypothetical
protein ZK1128.1 protein.
Length = 426
Score = 26.6 bits (56), Expect = 9.0
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Frame = +1
Query: 94 AQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNKCIVSIKSSFE------NQANNT 255
AQL+ D +++L K + L+ L E + CI + K+S + N+
Sbjct: 124 AQLMNDVLNALAKFNDKDVSVHLVETSDALIDEQEKSLCIYTSKNSIDTPFIRKNKTRTG 183
Query: 256 DNIHNVKNI------FSIFLRDEFIKQVP 324
NI+ K+I F++F+ +EF+ +P
Sbjct: 184 VNIYWYKSIDDIPDGFTVFIGNEFLDALP 212
>Z35719-8|CAA84801.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 26.6 bits (56), Expect = 9.0
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 106 RDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNKC----IVSIKSSFENQANNTDNIHNV 273
RD ID L+ K + +S V F ++K +V + +E++ + N + V
Sbjct: 595 RDTIDQTHPLYDKRYIKSKPVRSLTAEEFLFYHKAKEDGLVDVLIMYESEEDQDSNNYLV 654
Query: 274 KNIFS--IFLRDEFIKQVPQFRTI 339
S IF +DE+ + V Q+ ++
Sbjct: 655 NKYLSDSIFQKDEYTENVEQWNSV 678
>Z35663-17|CAA84737.1| 1521|Caenorhabditis elegans Hypothetical
protein T04A8.14 protein.
Length = 1521
Score = 26.6 bits (56), Expect = 9.0
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 106 RDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNKC----IVSIKSSFENQANNTDNIHNV 273
RD ID L+ K + +S V F ++K +V + +E++ + N + V
Sbjct: 595 RDTIDQTHPLYDKRYIKSKPVRSLTAEEFLFYHKAKEDGLVDVLIMYESEEDQDSNNYLV 654
Query: 274 KNIFS--IFLRDEFIKQVPQFRTI 339
S IF +DE+ + V Q+ ++
Sbjct: 655 NKYLSDSIFQKDEYTENVEQWNSV 678
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +1
Query: 313 KQVPQFRTIMQY-LQTYYNPTPAPDVDEIMCQSCKPAN 423
K + FR ++++ L T PTP PDV + M + K N
Sbjct: 671 KNLDWFRKLLEHTLPTDGKPTPEPDVSQSMYKRLKLIN 708
>D14635-1|BAA03484.1| 1521|Caenorhabditis elegans EMB-5 protein.
Length = 1521
Score = 26.6 bits (56), Expect = 9.0
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Frame = +1
Query: 106 RDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNKC----IVSIKSSFENQANNTDNIHNV 273
RD ID L+ K + +S V F ++K +V + +E++ + N + V
Sbjct: 595 RDTIDQTHPLYDKRYIKSKPVRSLTAEEFLFYHKAKEDGLVDVLIMYESEEDQDSNNYLV 654
Query: 274 KNIFS--IFLRDEFIKQVPQFRTI 339
S IF +DE+ + V Q+ ++
Sbjct: 655 NKYLSDSIFQKDEYTENVEQWNSV 678
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,233,684
Number of Sequences: 27780
Number of extensions: 237936
Number of successful extensions: 849
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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