Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15e01
         (204 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.    21   4.0  
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    21   4.0  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    20   9.2  

>DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -3

Query: 187 MFNKCELIKI 158
           +FNKCEL+++
Sbjct: 20  VFNKCELVRL 29


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -3

Query: 187 MFNKCELIKI 158
           +FNKCEL+++
Sbjct: 20  VFNKCELVRL 29


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 42  CFLHLTLSYNLLVNFFNP 95
           CF+++ + Y+L+ N   P
Sbjct: 270 CFIYIYVIYDLIANECTP 287


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,311
Number of Sequences: 2352
Number of extensions: 2841
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 563,979
effective HSP length: 45
effective length of database: 458,139
effective search space used: 10079058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)