Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15e01
         (204 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L78440-1|AAB05605.1|  748|Homo sapiens signal transducer and act...    31   0.90 
BC031212-1|AAH31212.1|  748|Homo sapiens STAT4 protein protein.        31   0.90 
AF423072-1|AAL12164.1|  652|Homo sapiens signal transducer and a...    31   0.90 
AC067945-3|AAY24184.1|  657|Homo sapiens unknown protein.              31   0.90 
AB209043-1|BAD92280.1|  332|Homo sapiens signal transducer and a...    31   0.90 

>L78440-1|AAB05605.1|  748|Homo sapiens signal transducer and
           activator of transcription 4 protein.
          Length = 748

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
 Frame = +3

Query: 27  PSASACFLHLTLSYN---LLVNFFNPPPSRLSLIFKILKEHFQTILYIFINSHLLNIVYK 197
           P+A A  +   +S N    LV F NPPP+ LS + +++   F + +   +NS  L+++ +
Sbjct: 461 PNAWASIIWYNVSTNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAE 520

Query: 198 K 200
           K
Sbjct: 521 K 521


>BC031212-1|AAH31212.1|  748|Homo sapiens STAT4 protein protein.
          Length = 748

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
 Frame = +3

Query: 27  PSASACFLHLTLSYN---LLVNFFNPPPSRLSLIFKILKEHFQTILYIFINSHLLNIVYK 197
           P+A A  +   +S N    LV F NPPP+ LS + +++   F + +   +NS  L+++ +
Sbjct: 461 PNAWASIIWYNVSTNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAE 520

Query: 198 K 200
           K
Sbjct: 521 K 521


>AF423072-1|AAL12164.1|  652|Homo sapiens signal transducer and
           activator of transcription 4 protein.
          Length = 652

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
 Frame = +3

Query: 27  PSASACFLHLTLSYN---LLVNFFNPPPSRLSLIFKILKEHFQTILYIFINSHLLNIVYK 197
           P+A A  +   +S N    LV F NPPP+ LS + +++   F + +   +NS  L+++ +
Sbjct: 365 PNAWASIIWYNVSTNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAE 424

Query: 198 K 200
           K
Sbjct: 425 K 425


>AC067945-3|AAY24184.1|  657|Homo sapiens unknown protein.
          Length = 657

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
 Frame = +3

Query: 27  PSASACFLHLTLSYN---LLVNFFNPPPSRLSLIFKILKEHFQTILYIFINSHLLNIVYK 197
           P+A A  +   +S N    LV F NPPP+ LS + +++   F + +   +NS  L+++ +
Sbjct: 370 PNAWASIIWYNVSTNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAE 429

Query: 198 K 200
           K
Sbjct: 430 K 430


>AB209043-1|BAD92280.1|  332|Homo sapiens signal transducer and
           activator of transcription 4 variant protein.
          Length = 332

 Score = 30.7 bits (66), Expect = 0.90
 Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
 Frame = +3

Query: 27  PSASACFLHLTLSYN---LLVNFFNPPPSRLSLIFKILKEHFQTILYIFINSHLLNIVYK 197
           P+A A  +   +S N    LV F NPPP+ LS + +++   F + +   +NS  L+++ +
Sbjct: 111 PNAWASIIWYNVSTNDSQNLVFFNNPPPATLSQLLEVMSWQFSSYVGRGLNSDQLHMLAE 170

Query: 198 K 200
           K
Sbjct: 171 K 171


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,627,903
Number of Sequences: 237096
Number of extensions: 349407
Number of successful extensions: 624
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 76,859,062
effective HSP length: 46
effective length of database: 65,952,646
effective search space used: 1385005566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)