Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15e01
(204 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 25 0.090
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 0.27
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 0.36
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 0.36
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 21 1.5
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 21 1.5
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 20 2.6
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 20 2.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 19 5.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 19 5.9
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 19 5.9
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 19 7.8
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 25.0 bits (52), Expect = 0.090
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 118 INDNLEGGGLKKFTSKLYDNVRCK 47
++ +EG G+ + S L DN++C+
Sbjct: 220 VSSKVEGNGVHEENSPLEDNIKCE 243
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.4 bits (48), Expect = 0.27
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 6 HLPACNAPSASACFLHLTLSYNLLVNFFNPPPSRLSLIFKILKEHFQTILYIFINS 173
H+P S + F + + L PP S + ++ L +HF + IFI+S
Sbjct: 122 HIPVIGISSRDSAFSDKNIHVSFLRTV--PPYSHQTDVWVELLKHFNYMKVIFIHS 175
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.0 bits (47), Expect = 0.36
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 48 LHLTLSYNLLVNFFNPPPSRLSLIFKILKEH-FQTILYI 161
L L YN +PPP++ + K++K H F T LYI
Sbjct: 889 LALAEPYNQRGTVVSPPPTKRRTM-KVVKYHLFLTNLYI 926
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.0 bits (47), Expect = 0.36
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 48 LHLTLSYNLLVNFFNPPPSRLSLIFKILKEH-FQTILYI 161
L L YN +PPP++ + K++K H F T LYI
Sbjct: 927 LALAEPYNQRGTVVSPPPTKRRTM-KVVKYHLFLTNLYI 964
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 21.0 bits (42), Expect = 1.5
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +3
Query: 42 CFLHLTLSYNLLVNFFNPPPSRLSLIFKILKEHFQTILYIFINSHLLN 185
C L + L+ + F+ + + IFKI+K + I I L++
Sbjct: 37 CVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITRYIIRMFLIS 84
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 21.0 bits (42), Expect = 1.5
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +3
Query: 42 CFLHLTLSYNLLVNFFNPPPSRLSLIFKILKEHFQTILYIFINSHLLN 185
C L + L+ + F+ + + IFKI+K + I I L++
Sbjct: 20 CVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITRYIIRMFLIS 67
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 20.2 bits (40), Expect = 2.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 123 KILKEHFQTILYIFINSHLLNIVYK 197
KILK+ F F+ S IVYK
Sbjct: 59 KILKDGFPIKCGTFLGSGGFGIVYK 83
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.2 bits (40), Expect = 2.6
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +3
Query: 81 NFFNPPP 101
NF+NPPP
Sbjct: 1162 NFWNPPP 1168
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 19.0 bits (37), Expect = 5.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 63 SYNLLVNFFNPPPSRLSLIFKILKEHFQTIL 155
S +L V++ PP + + I + K H++ IL
Sbjct: 1125 SQSLQVSWQPPPNTHSNGIIQGYKLHYEPIL 1155
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 19.0 bits (37), Expect = 5.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +3
Query: 63 SYNLLVNFFNPPPSRLSLIFKILKEHFQTIL 155
S +L V++ PP + + I + K H++ IL
Sbjct: 1121 SQSLQVSWQPPPNTHSNGIIQGYKLHYEPIL 1151
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 19.0 bits (37), Expect = 5.9
Identities = 6/20 (30%), Positives = 12/20 (60%)
Frame = +3
Query: 66 YNLLVNFFNPPPSRLSLIFK 125
++++ N + P P + IFK
Sbjct: 644 FDIIQNIYIPEPQDIENIFK 663
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 18.6 bits (36), Expect = 7.8
Identities = 8/33 (24%), Positives = 15/33 (45%)
Frame = -1
Query: 114 MIISKEVD*RNLLVNYMIM*DVRSMQTRLVRCT 16
+I S EV NY + + ++ ++ CT
Sbjct: 503 LITSSEVRQPGKAPNYSVNWTIGQLEAEVINCT 535
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,335
Number of Sequences: 438
Number of extensions: 875
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 2785926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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