Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15d24
         (417 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX640644-1|CAE45790.1|  283|Homo sapiens hypothetical protein pr...    29   6.2  
BX538178-1|CAD98052.1| 1175|Homo sapiens hypothetical protein pr...    29   6.2  
BX538177-1|CAD98051.1| 1175|Homo sapiens hypothetical protein pr...    29   6.2  
BC146821-1|AAI46822.1| 1176|Homo sapiens Unknown (protein for IM...    29   6.2  
AK126804-1|BAC86701.1|  969|Homo sapiens protein ( Homo sapiens ...    29   6.2  
AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein.             29   6.2  
AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein.             29   6.2  

>BX640644-1|CAE45790.1|  283|Homo sapiens hypothetical protein
           protein.
          Length = 283

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 88  HMWHRLKNDDGDDKTM 41
           HM HRL +DDGD  TM
Sbjct: 249 HMVHRLSSDDGDSSTM 264


>BX538178-1|CAD98052.1| 1175|Homo sapiens hypothetical protein
           protein.
          Length = 1175

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 88  HMWHRLKNDDGDDKTM 41
           HM HRL +DDGD  TM
Sbjct: 249 HMVHRLSSDDGDSSTM 264


>BX538177-1|CAD98051.1| 1175|Homo sapiens hypothetical protein
           protein.
          Length = 1175

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 88  HMWHRLKNDDGDDKTM 41
           HM HRL +DDGD  TM
Sbjct: 249 HMVHRLSSDDGDSSTM 264


>BC146821-1|AAI46822.1| 1176|Homo sapiens Unknown (protein for
           IMAGE:8860431) protein.
          Length = 1176

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 88  HMWHRLKNDDGDDKTM 41
           HM HRL +DDGD  TM
Sbjct: 249 HMVHRLSSDDGDSSTM 264


>AK126804-1|BAC86701.1|  969|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44854 fis, clone BRACE3052410, highly  similar
           to Homo sapiens IDN3 protein (IDN3). ).
          Length = 969

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 88  HMWHRLKNDDGDDKTM 41
           HM HRL +DDGD  TM
Sbjct: 117 HMVHRLSSDDGDSSTM 132


>AJ640137-1|CAG26691.1| 2697|Homo sapiens delangin protein.
          Length = 2697

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 88  HMWHRLKNDDGDDKTM 41
           HM HRL +DDGD  TM
Sbjct: 249 HMVHRLSSDDGDSSTM 264


>AJ627032-1|CAF25290.1| 2804|Homo sapiens delangin protein.
          Length = 2804

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -3

Query: 88  HMWHRLKNDDGDDKTM 41
           HM HRL +DDGD  TM
Sbjct: 249 HMVHRLSSDDGDSSTM 264


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,197,425
Number of Sequences: 237096
Number of extensions: 1077085
Number of successful extensions: 3275
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3274
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)