Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15d15
(525 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical ... 168 2e-42
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 92 2e-19
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 92 2e-19
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 92 2e-19
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 84 5e-17
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 84 5e-17
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 83 9e-17
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 83 9e-17
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 83 9e-17
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 79 2e-15
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 79 2e-15
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 69 2e-12
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 69 2e-12
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 69 2e-12
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 64 8e-11
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 64 8e-11
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 37 0.010
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 33 0.095
U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical p... 30 0.88
Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical pr... 28 3.6
U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm recept... 28 3.6
>AC024827-1|AAF60806.2| 581|Caenorhabditis elegans Hypothetical
protein Y55F3AR.3 protein.
Length = 581
Score = 168 bits (408), Expect = 2e-42
Identities = 72/145 (49%), Positives = 109/145 (75%)
Frame = +3
Query: 90 MALHVPKAPGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHI 269
MA+ +PK+ G + +K+GA+ F G +EAV RNI AC + A +RSAYGPNGMNKM+INHI
Sbjct: 1 MAMKIPKS-GYNRFMKEGAQHFKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHI 59
Query: 270 DKQFVTSDAGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXR 449
+K FVT+DA TI++EL+++HPAA+++++A++MQ+ ++GD TN V++L+
Sbjct: 60 EKLFVTNDAATILKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIH 119
Query: 450 LGVTTSEIADGYERALDKCLEILPS 524
+G+T E+A GYE+A +K LEILP+
Sbjct: 120 MGMTPQEVAAGYEQAAEKALEILPT 144
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 92.3 bits (219), Expect = 2e-19
Identities = 49/137 (35%), Positives = 80/137 (58%)
Frame = +3
Query: 114 PGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSD 293
P + ++ + +G+E AV +I A + A ++R++ GP G++KM+++ +T+D
Sbjct: 16 PFIVMREQENQKRITGVE-AVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 473
TI+ ++DV+H AKLMV S+ QD E+GDGT V+VL+G G+ +I
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 474 ADGYERALDKCLEILPS 524
ADG++ A K LE L S
Sbjct: 135 ADGFDLACKKALETLDS 151
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 92.3 bits (219), Expect = 2e-19
Identities = 49/137 (35%), Positives = 80/137 (58%)
Frame = +3
Query: 114 PGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSD 293
P + ++ + +G+E AV +I A + A ++R++ GP G++KM+++ +T+D
Sbjct: 16 PFIVMREQENQKRITGVE-AVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 473
TI+ ++DV+H AKLMV S+ QD E+GDGT V+VL+G G+ +I
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 474 ADGYERALDKCLEILPS 524
ADG++ A K LE L S
Sbjct: 135 ADGFDLACKKALETLDS 151
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 92.3 bits (219), Expect = 2e-19
Identities = 49/137 (35%), Positives = 80/137 (58%)
Frame = +3
Query: 114 PGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSD 293
P + ++ + +G+E AV +I A + A ++R++ GP G++KM+++ +T+D
Sbjct: 16 PFIVMREQENQKRITGVE-AVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITND 74
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 473
TI+ ++DV+H AKLMV S+ QD E+GDGT V+VL+G G+ +I
Sbjct: 75 GATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKI 134
Query: 474 ADGYERALDKCLEILPS 524
ADG++ A K LE L S
Sbjct: 135 ADGFDLACKKALETLDS 151
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 84.2 bits (199), Expect = 5e-17
Identities = 38/113 (33%), Positives = 68/113 (60%)
Frame = +3
Query: 180 RNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLAS 359
+N+ A A V+S+ GP G++KM+++ + VT+D TI+++L+VEHPA K++V +
Sbjct: 24 QNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELA 83
Query: 360 QMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL 518
Q+QD EVGDGT V++++ + V + I +GY A + ++ +
Sbjct: 84 QLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYI 136
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 84.2 bits (199), Expect = 5e-17
Identities = 38/113 (33%), Positives = 68/113 (60%)
Frame = +3
Query: 180 RNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLAS 359
+N+ A A V+S+ GP G++KM+++ + VT+D TI+++L+VEHPA K++V +
Sbjct: 24 QNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELA 83
Query: 360 QMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL 518
Q+QD EVGDGT V++++ + V + I +GY A + ++ +
Sbjct: 84 QLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYI 136
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 83.4 bits (197), Expect = 9e-17
Identities = 46/130 (35%), Positives = 71/130 (54%)
Frame = +3
Query: 129 MLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTII 308
+LKDG G + + NINAC+ A S+R+ GP G++K+I++ +++D TI+
Sbjct: 8 LLKDGTENKQGKGQII-SNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATIL 66
Query: 309 RELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYE 488
+ LD+ PAA MV ++ QDAEVGDGT V+VL+ GV +
Sbjct: 67 KLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIG 126
Query: 489 RALDKCLEIL 518
+A +K L+ L
Sbjct: 127 KACEKTLKNL 136
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 83.4 bits (197), Expect = 9e-17
Identities = 46/130 (35%), Positives = 71/130 (54%)
Frame = +3
Query: 129 MLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTII 308
+LKDG G + + NINAC+ A S+R+ GP G++K+I++ +++D TI+
Sbjct: 8 LLKDGTENKQGKGQII-SNINACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATIL 66
Query: 309 RELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYE 488
+ LD+ PAA MV ++ QDAEVGDGT V+VL+ GV +
Sbjct: 67 KLLDIVFPAASTMVDIARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIG 126
Query: 489 RALDKCLEIL 518
+A +K L+ L
Sbjct: 127 KACEKTLKNL 136
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 83.4 bits (197), Expect = 9e-17
Identities = 44/128 (34%), Positives = 70/128 (54%)
Frame = +3
Query: 129 MLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTII 308
+L G + SG + + NINACK A +R++ GP M KM+++ + +T+D I+
Sbjct: 11 VLSQGTKRESGHQVQI-GNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAIL 69
Query: 309 RELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYE 488
RE+ V+HPAAK M+ ++ QD E GDGT VI+L+G + I Y
Sbjct: 70 REITVKHPAAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYR 129
Query: 489 RALDKCLE 512
+AL+ ++
Sbjct: 130 QALEDMIQ 137
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 79.0 bits (186), Expect = 2e-15
Identities = 40/112 (35%), Positives = 64/112 (57%)
Frame = +3
Query: 183 NINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQ 362
NI A K A +VR++ GP GM+KMI + +T+D TI+ ++ V HP AK++V S+
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 363 MQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL 518
QD E GDGT V+V++G G+ + I++ ++ A + +IL
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKIL 147
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 79.0 bits (186), Expect = 2e-15
Identities = 40/112 (35%), Positives = 64/112 (57%)
Frame = +3
Query: 183 NINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMVLASQ 362
NI A K A +VR++ GP GM+KMI + +T+D TI+ ++ V HP AK++V S+
Sbjct: 36 NIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSK 95
Query: 363 MQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL 518
QD E GDGT V+V++G G+ + I++ ++ A + +IL
Sbjct: 96 AQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKIL 147
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 69.3 bits (162), Expect = 2e-12
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Frame = +3
Query: 126 QMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQF----VTSD 293
Q+LKD A+ G E A + V+S GP GM+K++I+ + VT+D
Sbjct: 5 QILKDNAQEERG-ESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 473
TI++ + V++PAAK++V S QD EVGDGT V VL+ + I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 474 ADGYERALDKCLEIL 518
GY RAL E L
Sbjct: 124 ISGYRRALGIAQESL 138
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 69.3 bits (162), Expect = 2e-12
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Frame = +3
Query: 126 QMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQF----VTSD 293
Q+LKD A+ G E A + V+S GP GM+K++I+ + VT+D
Sbjct: 5 QILKDNAQEERG-ESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 473
TI++ + V++PAAK++V S QD EVGDGT V VL+ + I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 474 ADGYERALDKCLEIL 518
GY RAL E L
Sbjct: 124 ISGYRRALGIAQESL 138
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 69.3 bits (162), Expect = 2e-12
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Frame = +3
Query: 126 QMLKDGARMFSGLEEAVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQF----VTSD 293
Q+LKD A+ G E A + V+S GP GM+K++I+ + VT+D
Sbjct: 5 QILKDNAQEERG-ESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 294 AGTIIRELDVEHPAAKLMVLASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEI 473
TI++ + V++PAAK++V S QD EVGDGT V VL+ + I
Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTI 123
Query: 474 ADGYERALDKCLEIL 518
GY RAL E L
Sbjct: 124 ISGYRRALGIAQESL 138
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 63.7 bits (148), Expect = 8e-11
Identities = 34/116 (29%), Positives = 56/116 (48%)
Frame = +3
Query: 171 AVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMV 350
A+ NI+ + +RS GP G KM+++ +T D ++ E+ ++HP A ++
Sbjct: 19 ALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIA 78
Query: 351 LASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL 518
AS QD GDGT ++L G G+ + +G+E A K LE+L
Sbjct: 79 KASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELL 134
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 63.7 bits (148), Expect = 8e-11
Identities = 34/116 (29%), Positives = 56/116 (48%)
Frame = +3
Query: 171 AVYRNINACKQFAQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDVEHPAAKLMV 350
A+ NI+ + +RS GP G KM+++ +T D ++ E+ ++HP A ++
Sbjct: 19 ALELNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAIQHPTASMIA 78
Query: 351 LASQMQDAEVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALDKCLEIL 518
AS QD GDGT ++L G G+ + +G+E A K LE+L
Sbjct: 79 KASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELL 134
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 36.7 bits (81), Expect = 0.010
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Frame = +3
Query: 207 AQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDV----EHPAAKLMVLASQMQDA 374
A +V GP G N +I +T D T+ + +D+ ++ AKL+ + +
Sbjct: 39 ADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANE 98
Query: 375 EVGDGTNFVIVLSGXXXXXXXXXXRLGVTTSEIADGYERALD 500
E GDGT VL+ R G EI G A++
Sbjct: 99 EAGDGTTCATVLARAIAKEGFESIRQGGNAVEIRRGVMNAVE 140
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 33.5 bits (73), Expect = 0.095
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 207 AQSVRSAYGPNGMNKMIINHIDKQFVTSDAGTIIRELDV----EHPAAKLMVLASQMQDA 374
A +V GP G N +I +T D T+ + +D+ ++ AKL+ + +
Sbjct: 39 ADAVSVTMGPKGRNVIIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANE 98
Query: 375 EVGDGTNFVIVLS 413
E GDGT VL+
Sbjct: 99 EAGDGTTCATVLT 111
>U80437-10|AAN84839.1| 656|Caenorhabditis elegans Hypothetical
protein C43E11.11 protein.
Length = 656
Score = 30.3 bits (65), Expect = 0.88
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 272 INMIDDHFVHAIRAICRTHTLCKL 201
IN ID H H RA+C +H L ++
Sbjct: 483 INHIDMHMAHVSRAVCHSHVLSQI 506
>Z81466-3|CAB03867.1| 593|Caenorhabditis elegans Hypothetical
protein C09H6.3 protein.
Length = 593
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 39 ITRLKE*IEIKEF*STNMALHVPKAPGVPQMLKDGARMFSGLEEAVYRNINACKQFAQSV 218
IT L + +++ ++ + L PK QMLK+ ++ S + +N CK + V
Sbjct: 415 ITYLNQ-LKMADYYEVSENLTAPKISSCSQMLKNNVKLLSAFFAYITNKLNECKLLSHEV 473
>U53155-9|AAC48273.1| 328|Caenorhabditis elegans Seven tm receptor
protein 138 protein.
Length = 328
Score = 28.3 bits (60), Expect = 3.6
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -2
Query: 332 WMFHI*LSYDGASITGNKLLINMIDDHFVHAIRAICRTHTLCKL 201
W FH+ Y GAS + +LI+++ F + IC+ LCKL
Sbjct: 83 WGFHLMCLY-GASYS---VLISLLATQFFYRYLVICKPEHLCKL 122
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,082,140
Number of Sequences: 27780
Number of extensions: 207078
Number of successful extensions: 487
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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