Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15d04
(493 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 29 0.020
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 29 0.020
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 23 1.3
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 23 1.3
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 23 1.3
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 23 1.3
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 23 2.3
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 3.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 4.1
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 4.1
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 5.4
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 9.4
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 9.4
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 9.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.4
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 9.4
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 9.4
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.5 bits (63), Expect = 0.020
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -2
Query: 207 ELIINVANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 94
++I +++NNT +N ++ + ++ N +YN + YN+
Sbjct: 79 KIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNI 116
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.5 bits (63), Expect = 0.020
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = -2
Query: 207 ELIINVANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 94
++I +++NNT +N ++ + ++ N +YN + YN+
Sbjct: 79 KIISSLSNNTIHNNNYKYNYNNNNYNNNNYNKKLYYNI 116
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -2
Query: 207 ELIINVANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 94
++I +++NNT +N + K ++ N +YN + YN+
Sbjct: 80 KIISSLSNNTIHNNNY-----KYNYNNNNYNKKLYYNI 112
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -2
Query: 207 ELIINVANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 94
++I +++NNT +N + K ++ N +YN + YN+
Sbjct: 80 KIISSLSNNTIHNNNY-----KYNYNNNNYNKKLYYNI 112
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -2
Query: 207 ELIINVANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 94
++I +++NNT +N + K ++ N +YN + YN+
Sbjct: 80 KIISSLSNNTIHNNNY-----KYNYNNNNYNKKLYYNI 112
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = -2
Query: 207 ELIINVANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 94
++I +++NNT +N + K ++ N +YN + YN+
Sbjct: 80 KIISSLSNNTIHNNNY-----KYNYNNNNYNKKLYYNI 112
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 2.3
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -2
Query: 192 VANNTPLDNTFRTMFQKADFENFDYNTPIVYNL 94
++NN PL N + ++ +YN + YN+
Sbjct: 82 ISNNNPLSNNYNYNNNYNNYNKHNYN-KLYYNI 113
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 22.2 bits (45), Expect = 3.1
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = +2
Query: 149 NIVLNVLSSG-VLLATFIINSLHANERCSGDTS-ISSPFSICHRI 277
N++ N +G LLA + + NE CSG TS +C R+
Sbjct: 89 NVITNKTGNGGPLLAPYPDWTWAKNENCSGITSAYKIEIDMCDRL 133
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 4.1
Identities = 11/39 (28%), Positives = 16/39 (41%)
Frame = +2
Query: 200 INSLHANERCSGDTSISSPFSICHRIDSHILTTTAIWRP 316
+N+ N + SSP +DS + T A W P
Sbjct: 538 VNNNSGNGNTNSSARDSSPAIESISVDSGSINTVAEWEP 576
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 4.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 259 QYLPSYRFPHIDNNSN 306
+YL S F H D N+N
Sbjct: 235 EYLVSIMFSHYDRNNN 250
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/37 (21%), Positives = 20/37 (54%)
Frame = -1
Query: 121 LQYTDCVQFKNKNFNNVQRENKSCSQQTRSI*RSNDQ 11
++ T C ++ N+N N +N++ Q + +++Q
Sbjct: 414 MRNTRCGRYHNQNAGNQNADNQNADNQNANNQNADNQ 450
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 20.6 bits (41), Expect = 9.4
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +2
Query: 155 VLNVLSSGVLLATFIINSLHANERCSGDTSISSPFSICHRIDSH 286
+L G L I L+ N GD I SP +D H
Sbjct: 347 ILEPAKKGFKLKQGIQFHLYINTAPCGDARIFSPHEENESVDKH 390
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +2
Query: 200 INSLHANERCSGDTSISSPFSI 265
+N L N RC + +PF I
Sbjct: 407 VNELILNTRCENPDNDRTPFKI 428
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 262 YLPSYRFPHIDNNSNMATKRFFSGESSGEPL 354
Y P + D+ ++ KRF S +S E L
Sbjct: 389 YYPYHPSTQEDSEEHLTPKRFHSRAASKEDL 419
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1
Query: 262 YLPSYRFPHIDNNSNMATKRFFSGESSGEPL 354
Y P + D+ ++ KRF S +S E L
Sbjct: 389 YYPYHPSTQEDSEEHLTPKRFHSRAASKEDL 419
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 9.4
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -2
Query: 153 MFQKADFENFDYNTPIVYNLKTKTLTMYNERIRA 52
MF+ DF D + + KT T Y+ ++A
Sbjct: 1026 MFETVDFSKEDGKEHHLQIMNLKTYTQYSVVVQA 1059
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +2
Query: 200 INSLHANERCSGDTSISSPFSI 265
+N L N RC + +PF I
Sbjct: 407 VNELILNTRCENPDNDRTPFKI 428
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +2
Query: 200 INSLHANERCSGDTSISSPFSI 265
+N L N RC + +PF I
Sbjct: 407 VNELILNTRCENPDNDRTPFKI 428
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,380
Number of Sequences: 438
Number of extensions: 3141
Number of successful extensions: 18
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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