Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15c07
(510 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 30 1.1
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 27 6.0
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 27 6.0
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 27 6.0
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 27 6.0
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = -3
Query: 352 RCPNCNQVCR-RAQFQDLCKNLLHCRILRSCRCARICT*NCA--CCI*MNPI*RCATIVG 182
+C C C+ + +L + +S +C C +C C + PI +CAT
Sbjct: 470 QCQQCQSACQFPVVAPQVVAVILEASVSQSAQCEPQCQQSCQQQCIQQLQPIQQCATACT 529
Query: 181 RLCGTFCS 158
+ C CS
Sbjct: 530 QSCSQSCS 537
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 64 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 102
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 66 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 104
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = -3
Query: 340 CNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCACC 224
C C R + C+ C R+C C R CT CC
Sbjct: 69 CGCCCCRPRCCCCCRPKCCCTCCRTCCCTRCCTCCRPCC 107
>Z79695-4|CAB01969.3| 374|Caenorhabditis elegans Hypothetical
protein F27D4.4a protein.
Length = 374
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 310 EIAHDDILDCNWDSDQVYHLNEIIFHKQKSK 402
E+ D+ + NWDSD+ LNE++ K K+K
Sbjct: 133 EVEKDEETNENWDSDK---LNEVVNKKNKNK 160
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 91 PRCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 125
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 89 PRCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 123
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 90 PKCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 124
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 90 PRCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 124
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 346 PNCNQVCRRAQFQDLCKNLLHCRILRSCRCARICT*NCAC 227
P C CRR C C R C C R C C C
Sbjct: 91 PRCCCCCRRC-----CTCCRTCCCTRCCTCCRPCCCGCGC 125
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,595,413
Number of Sequences: 27780
Number of extensions: 189826
Number of successful extensions: 670
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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