Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15c01
(401 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p pro... 242 1e-64
AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA... 242 1e-64
M19494-1|AAA28935.1| 140|Drosophila melanogaster protein ( D.me... 52 4e-07
BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p pro... 52 4e-07
AL133505-2|CAB65841.1| 140|Drosophila melanogaster EG:BACH59J11... 52 4e-07
AL133505-1|CAB63528.1| 154|Drosophila melanogaster EG:BACH59J11... 52 4e-07
AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB ... 52 4e-07
AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical kn... 49 3e-06
AE014297-650|AAF54148.1| 358|Drosophila melanogaster CG18268-PA... 28 4.1
DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 prot... 28 5.4
AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p pro... 28 5.4
AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 prot... 28 5.4
AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-P... 28 5.4
AY119520-1|AAM50174.1| 667|Drosophila melanogaster GH14596p pro... 27 7.1
AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown prot... 27 7.1
AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA p... 27 7.1
BT003270-1|AAO25027.1| 926|Drosophila melanogaster LD20211p pro... 27 9.4
AY274380-1|AAP31303.1| 363|Drosophila melanogaster Hsc-70-inter... 27 9.4
AY274379-1|AAP31302.1| 363|Drosophila melanogaster Hsc-70-inter... 27 9.4
AY274377-1|AAP31300.1| 363|Drosophila melanogaster Hsc-70-inter... 27 9.4
AY274375-1|AAP31298.1| 363|Drosophila melanogaster Hsc-70-inter... 27 9.4
AY274374-1|AAP31297.1| 363|Drosophila melanogaster Hsc-70-inter... 27 9.4
AY274373-1|AAP31296.1| 363|Drosophila melanogaster Hsc-70-inter... 27 9.4
AY274372-1|AAP31295.1| 363|Drosophila melanogaster Hsc-70-inter... 27 9.4
AY274371-1|AAP31294.1| 363|Drosophila melanogaster Hsc-70-inter... 27 9.4
AY069361-1|AAL39506.1| 513|Drosophila melanogaster LD06532p pro... 27 9.4
AE014296-66|AAF47366.1| 926|Drosophila melanogaster CG7008-PA p... 27 9.4
>AY089523-1|AAL90261.1| 143|Drosophila melanogaster GM14585p
protein.
Length = 143
Score = 242 bits (593), Expect = 1e-64
Identities = 108/117 (92%), Positives = 116/117 (99%)
Frame = +1
Query: 49 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 228
MGKPRG+RTARKHVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
Query: 229 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPG 399
QPNSAIRKCVRVQLIKNGKK+TAFVPRDG LN+IEENDEVLVAGFGRKGHAVGDIPG
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPG 117
>AE013599-1845|AAF58277.2| 143|Drosophila melanogaster CG8415-PA
protein.
Length = 143
Score = 242 bits (593), Expect = 1e-64
Identities = 108/117 (92%), Positives = 116/117 (99%)
Frame = +1
Query: 49 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 228
MGKPRG+RTARKHVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAK
Sbjct: 1 MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAK 60
Query: 229 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPG 399
QPNSAIRKCVRVQLIKNGKK+TAFVPRDG LN+IEENDEVLVAGFGRKGHAVGDIPG
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPG 117
>M19494-1|AAA28935.1| 140|Drosophila melanogaster protein (
D.melanogaster tko (technical knockout) locus mRNA
encoding tko gene product,complete cds. ).
Length = 140
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/87 (35%), Positives = 54/87 (62%)
Frame = +1
Query: 139 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 318
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 319 LNHIEENDEVLVAGFGRKGHAVGDIPG 399
++++E++ +++ GR + D+PG
Sbjct: 99 GHNLQEHN-IVLCRVGR----LQDVPG 120
>BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p
protein.
Length = 140
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/87 (35%), Positives = 54/87 (62%)
Frame = +1
Query: 139 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 318
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 319 LNHIEENDEVLVAGFGRKGHAVGDIPG 399
++++E++ +++ GR + D+PG
Sbjct: 99 GHNLQEHN-IVLCRVGR----LQDVPG 120
>AL133505-2|CAB65841.1| 140|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 140
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/87 (35%), Positives = 54/87 (62%)
Frame = +1
Query: 139 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 318
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 319 LNHIEENDEVLVAGFGRKGHAVGDIPG 399
++++E++ +++ GR + D+PG
Sbjct: 99 GHNLQEHN-IVLCRVGR----LQDVPG 120
>AL133505-1|CAB63528.1| 154|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 154
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/87 (35%), Positives = 54/87 (62%)
Frame = +1
Query: 139 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 318
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 112
Query: 319 LNHIEENDEVLVAGFGRKGHAVGDIPG 399
++++E++ +++ GR + D+PG
Sbjct: 113 GHNLQEHN-IVLCRVGR----LQDVPG 134
>AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB
protein.
Length = 140
Score = 51.6 bits (118), Expect = 4e-07
Identities = 31/87 (35%), Positives = 54/87 (62%)
Frame = +1
Query: 139 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 318
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIP--GI 98
Query: 319 LNHIEENDEVLVAGFGRKGHAVGDIPG 399
++++E++ +++ GR + D+PG
Sbjct: 99 GHNLQEHN-IVLCRVGR----LQDVPG 120
>AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical
knockout protein protein.
Length = 140
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/87 (34%), Positives = 53/87 (60%)
Frame = +1
Query: 139 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 318
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+ GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR-HSTGKEMVAYIP--GI 98
Query: 319 LNHIEENDEVLVAGFGRKGHAVGDIPG 399
++++E++ +++ GR + D+PG
Sbjct: 99 GHNLQEHN-IVLCRVGR----LQDVPG 120
>AE014297-650|AAF54148.1| 358|Drosophila melanogaster CG18268-PA
protein.
Length = 358
Score = 28.3 bits (60), Expect = 4.1
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +1
Query: 166 PFGGASHAKGIVLEKVGVEAK--QPNSAIRKCVRVQLIK 276
PFG + +VLE+ G K Q IRKCV + +K
Sbjct: 123 PFGNVEYVLKVVLERRGTHNKCFQQRLVIRKCVELADLK 161
>DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 protein.
Length = 1228
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 194 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 93
PF PP VP++A L L R +RRW
Sbjct: 910 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 943
>AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p protein.
Length = 1241
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 194 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 93
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 protein.
Length = 1241
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 194 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 93
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-PA
protein.
Length = 1241
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -1
Query: 194 PFA*DAPPKGLAFHFVPMWAFLNSLSAHRCSRRW 93
PF PP VP++A L L R +RRW
Sbjct: 917 PFVYSCPPSFYDSVLVPLFAHLAPLMCERLTRRW 950
>AY119520-1|AAM50174.1| 667|Drosophila melanogaster GH14596p
protein.
Length = 667
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 147 YEMEG*PFRWCISRKGHRPRESWCRS*AAQLC 242
YE+E P W + HR R+++C +LC
Sbjct: 267 YEVEANPSLWLSTLSQHRVRDTFCSYGVIELC 298
>AF246991-1|AAF64300.1| 1640|Drosophila melanogaster unknown protein.
Length = 1640
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 147 YEMEG*PFRWCISRKGHRPRESWCRS*AAQLC 242
YE+E P W + HR R+++C +LC
Sbjct: 1240 YEVEANPSLWLSTLSQHRVRDTFCSYGVIELC 1271
>AE014296-64|AAF47364.2| 1773|Drosophila melanogaster CG7020-PA
protein.
Length = 1773
Score = 27.5 bits (58), Expect = 7.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +3
Query: 147 YEMEG*PFRWCISRKGHRPRESWCRS*AAQLC 242
YE+E P W + HR R+++C +LC
Sbjct: 1373 YEVEANPSLWLSTLSQHRVRDTFCSYGVIELC 1404
>BT003270-1|AAO25027.1| 926|Drosophila melanogaster LD20211p
protein.
Length = 926
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 241 AIRKCVRVQLIKNGKKVTAFVPRDGCL 321
A+R V+ + +G ++ FVP+D CL
Sbjct: 534 ALRTEAIVEFVASGSRLRIFVPKDSCL 560
>AY274380-1|AAP31303.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 27.1 bits (57), Expect = 9.4
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 79 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 258
RK +R+QR A KE +K + + + F GA+ G + + +G + SA +
Sbjct: 250 RKIKERQRDQRRARKEQEKHNASSGGSSGEFSGANPGNGNMSDILGAMSDPEVSAAIQ-- 307
Query: 259 RVQLIKNGKKVTAFVPRDGCLNHIEE--NDEVLVAGFGRKGHAVG 387
++ N +T + N I++ + A FG+ G G
Sbjct: 308 --DILSNPGNITKYASNPKIYNLIKKIVPGGDVGAAFGQAGEKAG 350
>AY274379-1|AAP31302.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 27.1 bits (57), Expect = 9.4
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 79 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 258
RK +R+QR A KE +K + + + F GA+ G + + +G + SA +
Sbjct: 250 RKIKERQRDQRRARKEQEKHNASSGGSSGEFSGANPGNGNMSDILGAMSDPEVSAAIQ-- 307
Query: 259 RVQLIKNGKKVTAFVPRDGCLNHIEE--NDEVLVAGFGRKGHAVG 387
++ N +T + N I++ + A FG+ G G
Sbjct: 308 --DILSNPGNITKYASNPKIYNLIKKIVPGGDVGAAFGQAGEKAG 350
>AY274377-1|AAP31300.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 27.1 bits (57), Expect = 9.4
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 79 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 258
RK +R+QR A KE +K + + + F GA+ G + + +G + SA +
Sbjct: 250 RKIKERQRDQRRARKEQEKHNASSGGSSGEFSGANPGNGNMSDILGAMSDPEVSAAIQ-- 307
Query: 259 RVQLIKNGKKVTAFVPRDGCLNHIEE--NDEVLVAGFGRKGHAVG 387
++ N +T + N I++ + A FG+ G G
Sbjct: 308 --DILSNPGNITKYASNPKIYNLIKKIVPGGDVGAAFGQAGEKAG 350
>AY274375-1|AAP31298.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 27.1 bits (57), Expect = 9.4
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 79 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 258
RK +R+QR A KE +K + + + F GA+ G + + +G + SA +
Sbjct: 250 RKIKERQRDQRRARKEQEKHNASSGGSSGEFSGANPGNGNMSDILGAMSDPEVSAAIQ-- 307
Query: 259 RVQLIKNGKKVTAFVPRDGCLNHIEE--NDEVLVAGFGRKGHAVG 387
++ N +T + N I++ + A FG+ G G
Sbjct: 308 --DILSNPGNITKYASNPKIYNLIKKIVPGGDVGAAFGQAGEKAG 350
>AY274374-1|AAP31297.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 27.1 bits (57), Expect = 9.4
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 79 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 258
RK +R+QR A KE +K + + + F GA+ G + + +G + SA +
Sbjct: 250 RKIKERQRDQRRARKEQEKHNASSGGSSGEFSGANPGNGNMSDILGAMSDPEVSAAIQ-- 307
Query: 259 RVQLIKNGKKVTAFVPRDGCLNHIEE--NDEVLVAGFGRKGHAVG 387
++ N +T + N I++ + A FG+ G G
Sbjct: 308 --DILSNPGNITKYASNPKIYNLIKKIVPGGDVGAAFGQAGEKAG 350
>AY274373-1|AAP31296.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 27.1 bits (57), Expect = 9.4
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 79 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 258
RK +R+QR A KE +K + + + F GA+ G + + +G + SA +
Sbjct: 250 RKIKERQRDQRRARKEQEKHNASSGGSSGEFSGANPGNGNMSDILGAMSDPEVSAAIQ-- 307
Query: 259 RVQLIKNGKKVTAFVPRDGCLNHIEE--NDEVLVAGFGRKGHAVG 387
++ N +T + N I++ + A FG+ G G
Sbjct: 308 --DILSNPGNITKYASNPKIYNLIKKIVPGGDVGAAFGQAGEKAG 350
>AY274372-1|AAP31295.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 27.1 bits (57), Expect = 9.4
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 79 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 258
RK +R+QR A KE +K + + + F GA+ G + + +G + SA +
Sbjct: 250 RKIKERQRDQRRARKEQEKHNASSGGSSGEFSGANPGNGNMSDILGAMSDPEVSAAIQ-- 307
Query: 259 RVQLIKNGKKVTAFVPRDGCLNHIEE--NDEVLVAGFGRKGHAVG 387
++ N +T + N I++ + A FG+ G G
Sbjct: 308 --DILSNPGNITKYASNPKIYNLIKKIVPGGDVGAAFGQAGEKAG 350
>AY274371-1|AAP31294.1| 363|Drosophila melanogaster
Hsc-70-interacting protein-likeprotein protein.
Length = 363
Score = 27.1 bits (57), Expect = 9.4
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 79 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCV 258
RK +R+QR A KE +K + + + F GA+ G + + +G + SA +
Sbjct: 250 RKIKERQRDQRRARKEQEKHNASSGGSSGEFSGANPGNGNMSDILGAMSDPEVSAAIQ-- 307
Query: 259 RVQLIKNGKKVTAFVPRDGCLNHIEE--NDEVLVAGFGRKGHAVG 387
++ N +T + N I++ + A FG+ G G
Sbjct: 308 --DILSNPGNITKYASNPKIYNLIKKIVPGGDVGAAFGQAGEKAG 350
>AY069361-1|AAL39506.1| 513|Drosophila melanogaster LD06532p
protein.
Length = 513
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 241 AIRKCVRVQLIKNGKKVTAFVPRDGCL 321
A+R V+ + +G ++ FVP+D CL
Sbjct: 121 ALRTEAIVEFVASGSRLRIFVPKDSCL 147
>AE014296-66|AAF47366.1| 926|Drosophila melanogaster CG7008-PA
protein.
Length = 926
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +1
Query: 241 AIRKCVRVQLIKNGKKVTAFVPRDGCL 321
A+R V+ + +G ++ FVP+D CL
Sbjct: 534 ALRTEAIVEFVASGSRLRIFVPKDSCL 560
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,363,586
Number of Sequences: 53049
Number of extensions: 447919
Number of successful extensions: 1331
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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