Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15c01
         (401 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical pr...   220   3e-58
Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical pr...    51   4e-07
AC084196-2|AAK39622.1|  355|Caenorhabditis elegans Hypothetical ...    30   0.54 
U41011-4|AAA82287.1|  294|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical pr...    27   3.8  
AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical ...    27   5.0  
U97402-2|AAB63409.2|  393|Caenorhabditis elegans Hypothetical pr...    27   6.7  
U97402-1|ABB51193.1|  393|Caenorhabditis elegans Hypothetical pr...    27   6.7  
AF036693-4|AAK29786.1|  360|Caenorhabditis elegans Hypothetical ...    27   6.7  
Z81041-7|CAE17709.1|   95|Caenorhabditis elegans Hypothetical pr...    26   8.8  
Z49128-8|CAA88960.2|  989|Caenorhabditis elegans Hypothetical pr...    26   8.8  
AL021171-6|CAA15960.2|  989|Caenorhabditis elegans Hypothetical ...    26   8.8  

>Z70684-7|CAA94601.1|  143|Caenorhabditis elegans Hypothetical
           protein F28D1.7 protein.
          Length = 143

 Score =  220 bits (538), Expect = 3e-58
 Identities = 97/117 (82%), Positives = 108/117 (92%)
 Frame = +1

Query: 49  MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAK 228
           MGKP+G+ TARK   HR+EQRW DK +KKAH+GT+WK+NPFGGASHAKGIVLEK+GVEAK
Sbjct: 1   MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAK 60

Query: 229 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPG 399
           QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN +EENDEVLV+GFGR GHAVGDIPG
Sbjct: 61  QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFVEENDEVLVSGFGRSGHAVGDIPG 117


>Z92838-1|CAB07406.1|  157|Caenorhabditis elegans Hypothetical
           protein T03D8.2 protein.
          Length = 157

 Score = 50.8 bits (116), Expect = 4e-07
 Identities = 30/66 (45%), Positives = 43/66 (65%)
 Frame = +1

Query: 175 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLV 354
           G SH KGIVL+ V    K+PNS  RKC  V+L   G +V A++P  G  ++++E+ +VLV
Sbjct: 72  GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128

Query: 355 AGFGRK 372
            G GR+
Sbjct: 129 KG-GRR 133


>AC084196-2|AAK39622.1|  355|Caenorhabditis elegans Hypothetical
           protein Y55D5A.3 protein.
          Length = 355

 Score = 30.3 bits (65), Expect = 0.54
 Identities = 25/98 (25%), Positives = 38/98 (38%)
 Frame = -3

Query: 393 NVTDGVTFTTESRH*YXXXXXXXX*ATVTGDECGHFLSVLNELYTDAFADGRVGLLSFYT 214
           N+T  V F       Y           +TG   G +   LN  Y+ A+ D    L+ FYT
Sbjct: 150 NITIHVDFVRNGTIQYSGLTFALYNGVLTGQRPGEYSVSLNARYSGAYIDNI--LMEFYT 207

Query: 213 NFLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFT 100
            F    +  +R   E  +    T+   ++ F R  LF+
Sbjct: 208 KFKRPVSFFIRDVLENQA----TYTEAVDAFSRTHLFS 241


>U41011-4|AAA82287.1|  294|Caenorhabditis elegans Hypothetical
           protein D2024.4 protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 120 VRPSLFTTVVHVLTRRSYSSG 58
           VRP + TTV+HV+ R    SG
Sbjct: 189 VRPGIMTTVIHVMDRNPMKSG 209


>Z81128-8|CAB03402.1|  811|Caenorhabditis elegans Hypothetical
           protein T23D8.9a protein.
          Length = 811

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 292 TAFVPRDGCLNHIEEN 339
           T FVP+DG LN I+EN
Sbjct: 653 TPFVPKDGVLNVIDEN 668


>AC084156-1|AAK68491.2|  466|Caenorhabditis elegans Hypothetical
           protein Y46E12BL.4 protein.
          Length = 466

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = -3

Query: 144 HVGFLEFFVRPSLFTTVVHVLTRRS--YSSGFTHLDSTTPIGYGWE 13
           HV  +E+  R      VV V T+ +  +++G+T L  TT   YGW+
Sbjct: 158 HVWQIEWPERQRGTHAVVGVATKNAPLHAAGYTALIGTTDESYGWD 203


>U97402-2|AAB63409.2|  393|Caenorhabditis elegans Hypothetical
           protein C30H7.2a protein.
          Length = 393

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 25  ADWCRAIQMGKPRGIRTARKHVNHRREQ-RWADKEFKKAH-MGTKWKANPF 171
           ADWCR  QM KP  +  + K  +    +  WA  +  K + + TK+  N +
Sbjct: 43  ADWCRFSQMLKPIFLEASEKFKDAAPGKIMWASVDADKNNDIATKYHVNKY 93


>U97402-1|ABB51193.1|  393|Caenorhabditis elegans Hypothetical
           protein C30H7.2b protein.
          Length = 393

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +1

Query: 25  ADWCRAIQMGKPRGIRTARKHVNHRREQ-RWADKEFKKAH-MGTKWKANPF 171
           ADWCR  QM KP  +  + K  +    +  WA  +  K + + TK+  N +
Sbjct: 43  ADWCRFSQMLKPIFLEASEKFKDAAPGKIMWASVDADKNNDIATKYHVNKY 93


>AF036693-4|AAK29786.1|  360|Caenorhabditis elegans Hypothetical
           protein C49A9.6 protein.
          Length = 360

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
 Frame = +1

Query: 55  KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFG--------GASHAKGIVLEK 210
           K   +  + KH  H  +  + D  FKK   GT+W    +G        G  + +G +   
Sbjct: 238 KTESLFVSNKH--HLEQGHFFDGNFKKNADGTRWTCQNYGQPVEQLAEGGINQRGKIFFT 295

Query: 211 VGVEAKQPNSAIRK 252
           V +E  QP    RK
Sbjct: 296 VKIENFQPARGNRK 309


>Z81041-7|CAE17709.1|   95|Caenorhabditis elegans Hypothetical
           protein C27A7.9 protein.
          Length = 95

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 268 AVHGRICGWQSWAA*LLHQLSRGRC 194
           AVH + C W +WAA      S G C
Sbjct: 16  AVHSQNCTWSNWAAWTTCSDSCGNC 40


>Z49128-8|CAA88960.2|  989|Caenorhabditis elegans Hypothetical
           protein M03C11.8 protein.
          Length = 989

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 31  WCRAIQMGKPRGIRTARKHVNHR 99
           WC +IQ+    G +  RKH+ HR
Sbjct: 464 WCPSIQLLTYYGSQDERKHLRHR 486


>AL021171-6|CAA15960.2|  989|Caenorhabditis elegans Hypothetical
           protein M03C11.8 protein.
          Length = 989

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 31  WCRAIQMGKPRGIRTARKHVNHR 99
           WC +IQ+    G +  RKH+ HR
Sbjct: 464 WCPSIQLLTYYGSQDERKHLRHR 486


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,338,122
Number of Sequences: 27780
Number of extensions: 225825
Number of successful extensions: 620
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)