Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15b22
         (534 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4558|AAF57019.1|  145|Drosophila melanogaster CG1359-PA...   129   3e-30
AE014134-1552|AAF52701.1|  219|Drosophila melanogaster CG9298-PA...    62   5e-10
BT010226-1|AAQ23544.1| 2240|Drosophila melanogaster RE72677p pro...    30   2.3  
AE014297-2224|AAF55327.2| 2240|Drosophila melanogaster CG14900-P...    30   2.3  
AB053260-1|BAB20634.1| 2240|Drosophila melanogaster Cad89D protein.    30   2.3  

>AE014297-4558|AAF57019.1|  145|Drosophila melanogaster CG1359-PA
           protein.
          Length = 145

 Score =  129 bits (311), Expect = 3e-30
 Identities = 57/94 (60%), Positives = 78/94 (82%)
 Frame = +3

Query: 252 EGKLMYGMLFSIKSFVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGV 431
           E KL YGMLFSIKSFVSKISP DPK+GF +YKT++Y LH LETPSGLKFV+NTD  A  V
Sbjct: 34  EAKLTYGMLFSIKSFVSKISPHDPKEGFLYYKTNRYALHYLETPSGLKFVLNTDTTAINV 93

Query: 432 RDLLKKIYAEIYVKYMIRNPLCEMGEPIVSDLFK 533
           ++LL+++YA+++V++++R+PL   G  + S+LF+
Sbjct: 94  KELLQQLYAKVWVEFVVRDPLWTPGTVVTSELFQ 127



 Score = 37.5 bits (83), Expect = 0.011
 Identities = 14/18 (77%), Positives = 18/18 (100%)
 Frame = +2

Query: 197 MTIYNLYIFDRYGTLLYY 250
           MTI+NLYIFD++GTLL+Y
Sbjct: 1   MTIFNLYIFDKFGTLLHY 18


>AE014134-1552|AAF52701.1|  219|Drosophila melanogaster CG9298-PA
           protein.
          Length = 219

 Score = 62.1 bits (144), Expect = 5e-10
 Identities = 27/86 (31%), Positives = 50/86 (58%)
 Frame = +3

Query: 273 MLFSIKSFVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTDNQAQGVRDLLKKI 452
           M + + +  S++SP     G    +   +TLHC +T +G+KF++ ++    G+  LL+K+
Sbjct: 114 MFYPLFAIASQLSPEPKSSGIEILEADTFTLHCFQTLTGIKFIIISETGLNGIDLLLRKV 173

Query: 453 YAEIYVKYMIRNPLCEMGEPIVSDLF 530
           Y E+Y  Y+++NP   +  PI  +LF
Sbjct: 174 Y-ELYSDYVLKNPFYSLEMPIRCELF 198


>BT010226-1|AAQ23544.1| 2240|Drosophila melanogaster RE72677p protein.
          Length = 2240

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 294  FVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTD 413
            FV K +   P +  ++Y+TS ++LH     SG++F+ + +
Sbjct: 2052 FVLKYNACQPVNNLNNYETSLFSLHSTGQDSGVEFLSSRE 2091


>AE014297-2224|AAF55327.2| 2240|Drosophila melanogaster CG14900-PA
            protein.
          Length = 2240

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 294  FVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTD 413
            FV K +   P +  ++Y+TS ++LH     SG++F+ + +
Sbjct: 2052 FVLKYNACQPVNNLNNYETSLFSLHSTGQDSGVEFLSSRE 2091


>AB053260-1|BAB20634.1| 2240|Drosophila melanogaster Cad89D protein.
          Length = 2240

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 294  FVSKISPLDPKDGFSHYKTSKYTLHCLETPSGLKFVMNTD 413
            FV K +   P +  ++Y+TS ++LH     SG++F+ + +
Sbjct: 2052 FVLKYNACQPVNNLNNYETSLFSLHSTGQDSGVEFLSSRE 2091


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,103,413
Number of Sequences: 53049
Number of extensions: 422382
Number of successful extensions: 824
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)