Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15b19
         (427 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D86965-1|BAA13201.2|  801|Homo sapiens KIAA0210 protein.               30   2.8  
BC013145-1|AAH13145.1|  795|Homo sapiens TBC1D5 protein protein.       30   2.8  
D79993-1|BAA11488.2|  655|Homo sapiens KIAA0171 protein.               29   8.7  
BC004467-1|AAH04467.1|  625|Homo sapiens clathrin interactor 1 p...    29   8.7  
AK092765-1|BAC03971.1|  625|Homo sapiens protein ( Homo sapiens ...    29   8.7  
AF434813-1|AAL30768.1|  625|Homo sapiens epsin 4 protein.              29   8.7  

>D86965-1|BAA13201.2|  801|Homo sapiens KIAA0210 protein.
          Length = 801

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 383 ILNPEYVDEQQLSVFDKLMELVLSW 309
           +LNPEY++    +VF +LME    W
Sbjct: 246 VLNPEYLEHDAYAVFSQLMETAEPW 270


>BC013145-1|AAH13145.1|  795|Homo sapiens TBC1D5 protein protein.
          Length = 795

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 383 ILNPEYVDEQQLSVFDKLMELVLSW 309
           +LNPEY++    +VF +LME    W
Sbjct: 240 VLNPEYLEHDAYAVFSQLMETAEPW 264


>D79993-1|BAA11488.2|  655|Homo sapiens KIAA0171 protein.
          Length = 655

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +2

Query: 338 QKQITAARQHILDLKCLKFRNKYDEMGK 421
           ++ +T+AR+HI DL+ L+  +  DE GK
Sbjct: 125 ERVVTSAREHIYDLRSLENYHFVDEHGK 152


>BC004467-1|AAH04467.1|  625|Homo sapiens clathrin interactor 1
           protein.
          Length = 625

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +2

Query: 338 QKQITAARQHILDLKCLKFRNKYDEMGK 421
           ++ +T+AR+HI DL+ L+  +  DE GK
Sbjct: 95  ERVVTSAREHIYDLRSLENYHFVDEHGK 122


>AK092765-1|BAC03971.1|  625|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35446 fis, clone SMINT2003644, weakly similar to
           Drosophila melanogaster epsin-like protein mRNA. ).
          Length = 625

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +2

Query: 338 QKQITAARQHILDLKCLKFRNKYDEMGK 421
           ++ +T+AR+HI DL+ L+  +  DE GK
Sbjct: 77  ERVVTSAREHIYDLRSLENYHFVDEHGK 104


>AF434813-1|AAL30768.1|  625|Homo sapiens epsin 4 protein.
          Length = 625

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +2

Query: 338 QKQITAARQHILDLKCLKFRNKYDEMGK 421
           ++ +T+AR+HI DL+ L+  +  DE GK
Sbjct: 95  ERVVTSAREHIYDLRSLENYHFVDEHGK 122


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,791,179
Number of Sequences: 237096
Number of extensions: 1334508
Number of successful extensions: 2323
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2322
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)