BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15b14
(571 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 24 4.0
AY324308-1|AAQ89693.1| 134|Anopheles gambiae insulin-like pepti... 23 5.3
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.8 bits (49), Expect = 4.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 283 FRYFCATSSSNKC 321
F FC+T SSN C
Sbjct: 1622 FNLFCSTGSSNSC 1634
>AY324308-1|AAQ89693.1| 134|Anopheles gambiae insulin-like peptide
2 precursor protein.
Length = 134
Score = 23.4 bits (48), Expect = 5.3
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 5/55 (9%)
Frame = -3
Query: 506 SQPFLQALVEGAQRGRQVSAFALETLNFVC--GLARLTH---DLVHVGCRRRIVI 357
S P AL+ R R ETL F+C LTH D VH +R+ +
Sbjct: 30 STPNSDALISQLTRSRYCGRRLTETLAFLCQGRYPMLTHYRTDYVHDQANQRVKV 84
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,517
Number of Sequences: 2352
Number of extensions: 13993
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -