Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15b14
(571 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 1.6
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 1.6
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 23 2.1
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 23 2.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.1
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 22 4.9
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 6.5
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 6.5
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 21 8.6
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 353 NILQSDAGTRRGRDHVSVVQARKQN 427
+I+Q+D TR D V ++A K+N
Sbjct: 333 DIIQNDRRTRHLSDRVVALEAEKKN 357
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 210 IVSIKSSFENQANNTDNIHNVKNIFSIFLRDEFIKQVP 323
I+S S+ NN N +N N ++ +I+QVP
Sbjct: 81 IISSLSNKTIHNNNNYNNNNYNNYKKLYYNINYIEQVP 118
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 210 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 323
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 210 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 323
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 210 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 323
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 210 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 323
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 210 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 323
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 210 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 323
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 210 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 323
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 210 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 323
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 120
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 210 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 323
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 353
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 2.1
Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 210 IVSIKSSFENQAN--NTDNIHNVKNIFSIFLRDEFIKQVP 323
I+S +S N N N N +N N ++ +I+Q+P
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNYNKLYYNINYIEQIP 353
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.8 bits (44), Expect = 4.9
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1
Query: 322 PNLGPLCNTCKHI 360
P+ P+CN CK +
Sbjct: 29 PSKEPICNICKRV 41
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.4 bits (43), Expect = 6.5
Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
Frame = +1
Query: 496 NGWDIFLRPMF-GMPLML 546
+G+DI LRP F G PL++
Sbjct: 46 DGYDIRLRPNFGGEPLLV 63
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +3
Query: 246 NNTDNIHNVKNIFSIFLRDEFIKQVP 323
NN N +N N ++ +I+Q+P
Sbjct: 95 NNNYNNYNKHNYNKLYYNINYIEQIP 120
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = +3
Query: 447 CRYLASSLSTLDEGL 491
C+ +ASS+S +EGL
Sbjct: 595 CKVIASSVSAGEEGL 609
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,343
Number of Sequences: 438
Number of extensions: 3251
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16381902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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