Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc15a22
(188 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 21 1.0
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 1.8
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 20 2.3
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 20 2.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 20 2.3
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 20 3.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 19 4.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 5.4
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 19 7.2
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 19 7.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 18 9.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 18 9.5
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 21.4 bits (43), Expect = 1.0
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 128 TDRNVRSKCRCSNVSCSSHYDAQLTAFFIDP 36
TDR +R+K V C A + + + DP
Sbjct: 74 TDRVIRAKLGKVGVHCMKTTQAVVVSLYEDP 104
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 20.6 bits (41), Expect = 1.8
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 30 GSRVDEERS*LRV 68
GSR DEER LR+
Sbjct: 295 GSRFDEERLTLRI 307
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.2 bits (40), Expect = 2.3
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = -1
Query: 164 RPSDRSGPGCVSTDRNVRSKCRCSNVSCSSHYDAQLTAFFIDPR 33
RP P V D VRS S V + D ++D R
Sbjct: 22 RPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSWVDRR 65
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 20.2 bits (40), Expect = 2.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -1
Query: 170 CSRPSDRSGPGCVS 129
C RPSD + P S
Sbjct: 268 CDRPSDEAEPSSTS 281
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.2 bits (40), Expect = 2.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 173 LCSRPSDRSGPGCVS 129
LC P R GP VS
Sbjct: 120 LCEVPESRDGPPSVS 134
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 19.8 bits (39), Expect = 3.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 170 CSRPSDRSGPGCVSTDRNVRSKCR 99
CSR R GCVS N S+ R
Sbjct: 21 CSRDWFRISAGCVSRISNRISRNR 44
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 91 FEHRHF 108
FEHRHF
Sbjct: 986 FEHRHF 991
Score = 19.4 bits (38), Expect = 4.1
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +2
Query: 131 RHIQDHSCLR 160
+ +QDH C+R
Sbjct: 1643 KSLQDHDCIR 1652
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.0 bits (37), Expect = 5.4
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -1
Query: 107 KCRCSNVSCSSHYDAQLTAF 48
K N+ C S Y +TA+
Sbjct: 1421 KYTLENLLCGSRYQIYVTAY 1440
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 86 THLNIDISNAHCG 124
T++ +DI N CG
Sbjct: 309 TNIVVDIRNEDCG 321
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 18.6 bits (36), Expect = 7.2
Identities = 8/35 (22%), Positives = 12/35 (34%)
Frame = -1
Query: 179 CFLCSRPSDRSGPGCVSTDRNVRSKCRCSNVSCSS 75
C + R P C S + + C +C S
Sbjct: 104 CVCMRKCPRRHRPVCASNGKIYANHCELHRAACHS 138
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 18.2 bits (35), Expect = 9.5
Identities = 7/34 (20%), Positives = 16/34 (47%)
Frame = +1
Query: 37 GSMKNAVNCAS*CELQDTFEHRHFERTLRSVETH 138
G++K + C+ + +F + ++R E H
Sbjct: 65 GALKLRIRCSDVHHFESSFNAQSWQRLTSLHELH 98
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 18.2 bits (35), Expect = 9.5
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = -1
Query: 95 SNVSCSSHYDAQLTAFFIDPRAK*STVQGND 3
S V+ + YD + PRA+ + G+D
Sbjct: 321 SGVAKDAAYDNIVLKLLTKPRARGCIIFGSD 351
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,355
Number of Sequences: 438
Number of extensions: 935
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used: 2558940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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