Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15a19
         (573 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,403...    31   0.86 
05_05_0315 - 24030695-24030787,24030896-24030995,24031120-240312...    29   2.0  
12_01_0008 + 63393-64004                                               29   3.5  
11_01_0009 + 67344-67955                                               29   3.5  
01_07_0232 + 42182942-42183490,42183593-42183661,42184320-421844...    29   3.5  
01_05_0490 + 22672241-22674679                                         29   3.5  
05_07_0280 - 28920864-28920971,28921076-28921175,28921267-289213...    28   6.1  
02_05_0665 - 30720842-30721003,30721290-30721448,30721555-307216...    28   6.1  

>01_01_0548 - 4033077-4033349,4034007-4034261,4034362-4034533,
            4034616-4034839,4035168-4035332,4035591-4035881,
            4035971-4036303,4036391-4036485,4036570-4036689,
            4036778-4036934,4037176-4037279,4037383-4037543,
            4037636-4037952,4038655-4038936,4039020-4039321,
            4039453-4039543,4040227-4040280,4040367-4040684,
            4041008-4041092,4041178-4041266,4041474-4041594,
            4042136-4042431
          Length = 1434

 Score = 30.7 bits (66), Expect = 0.86
 Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = -1

Query: 414  FYTEF*RFCSF---RKIVPAFAA*HLWRWWWP*RIVNMNLYNLIYSIIGTI 271
            FYT +  FC F   RK +PA+     WRW++    V+  LY L+ S  G +
Sbjct: 1329 FYTLWNLFCGFMIPRKRIPAW-----WRWYYWANPVSWTLYGLLTSQFGDL 1374


>05_05_0315 -
           24030695-24030787,24030896-24030995,24031120-24031247,
           24031350-24031517,24031626-24031741,24031773-24031896,
           24032085-24032254,24032255-24032999
          Length = 547

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +3

Query: 381 ENCKNVKTRYKIIN-GRFGKISILSHKPTSKLYLQKTISAHNFNVDE 518
           E+ K++ T  K +  G+FG  S+ +HK T + +  KTIS    +  E
Sbjct: 62  EDVKSIYTVGKELGRGQFGVTSLCTHKATGQRFACKTISKRKLSTKE 108


>12_01_0008 + 63393-64004
          Length = 203

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 326 HGHHHRHKCYAANAGTILRKLQKRQ 400
           H HHH H  YAA A      LQ++Q
Sbjct: 110 HHHHHHHHPYAAAAAAQSHHLQQQQ 134


>11_01_0009 + 67344-67955
          Length = 203

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 326 HGHHHRHKCYAANAGTILRKLQKRQ 400
           H HHH H  YAA A      LQ++Q
Sbjct: 110 HHHHHHHHPYAAAAAAQSHHLQQQQ 134


>01_07_0232 +
           42182942-42183490,42183593-42183661,42184320-42184451,
           42184547-42184600,42184714-42184758,42185383-42185522,
           42185777-42185902,42185985-42186002,42186631-42187276,
           42188121-42188843
          Length = 833

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 298 IVQIHIYDSSWPPPPPQML 354
           +VQ  I  SSWPPPPP  L
Sbjct: 401 LVQQPIAMSSWPPPPPVQL 419


>01_05_0490 + 22672241-22674679
          Length = 812

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 313 IYDSSWPPPPPQMLRCKRW 369
           + +++ PPPPP + R +RW
Sbjct: 332 VEETTMPPPPPPLTRSRRW 350


>05_07_0280 -
           28920864-28920971,28921076-28921175,28921267-28921394,
           28922013-28922180,28922280-28922395,28922584-28922736,
           28922904-28923047,28923401-28924133
          Length = 549

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +3

Query: 423 GRFGKISILSHKPTSKLYLQKTISA 497
           G+FG   + +HKPT + Y  K+I+A
Sbjct: 99  GQFGVTYLATHKPTGRRYACKSIAA 123


>02_05_0665 -
           30720842-30721003,30721290-30721448,30721555-30721687,
           30722042-30722227,30722377-30722906
          Length = 389

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 529 WTFISSTLKLCAEIVFCKYNLLVG 458
           WT I+  L++ A    CKYN+L G
Sbjct: 362 WTCITKWLRMHATCPLCKYNILKG 385


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,261,972
Number of Sequences: 37544
Number of extensions: 270789
Number of successful extensions: 1121
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)