Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15a19
         (573 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014135-30|ABC65827.1| 4056|Drosophila melanogaster CG33978-PA ...    30   1.9  
AE013599-125|AAM68336.3|  226|Drosophila melanogaster CG11680-PB...    30   2.6  
AF005239-1|AAC23709.1|  460|Drosophila melanogaster DEAD-box hel...    29   4.5  
X16969-1|CAA34840.1|  353|Drosophila melanogaster catalytic subu...    29   5.9  
M74121-1|AAC41573.1| 1293|Drosophila melanogaster maleless prote...    29   5.9  
M18655-1|AAA28412.1|  353|Drosophila melanogaster protein ( D.me...    29   5.9  
BT003604-1|AAO39607.1| 1191|Drosophila melanogaster GM01778p pro...    29   5.9  
AY069425-1|AAL39570.1|  353|Drosophila melanogaster LD13640p pro...    29   5.9  
AE014134-1676|AAS64669.1|  353|Drosophila melanogaster CG4379-PC...    29   5.9  
AE014134-1675|AAN10703.1|  353|Drosophila melanogaster CG4379-PB...    29   5.9  
AE014134-1674|AAF52797.1|  353|Drosophila melanogaster CG4379-PA...    29   5.9  
AE013599-123|AAF57297.1| 1293|Drosophila melanogaster CG11680-PA...    29   5.9  

>AE014135-30|ABC65827.1| 4056|Drosophila melanogaster CG33978-PA
            protein.
          Length = 4056

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 22/49 (44%), Positives = 28/49 (57%)
 Frame = +3

Query: 147  ANFKIFKKTSLFSNTVLS*MLSLIICASAVSTRSKN*CASILLFLLLNK 293
            A F  FK  +LFS+T+L+ M S+I   S  ST+ KN C   L  L L K
Sbjct: 3343 AAFNNFKNKNLFSSTILNKMWSVISTNSKSSTK-KN-CTEDLCKLFLAK 3389


>AE013599-125|AAM68336.3|  226|Drosophila melanogaster CG11680-PB,
           isoform B protein.
          Length = 226

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 25/89 (28%), Positives = 41/89 (46%)
 Frame = -3

Query: 283 NRNNKIDAHQFFERVDTAEAQIIKDSIYDNTVLLNRDVFLNILKFANDVFDNKAYMYVDD 104
           NR + ID  Q    ++ AEA  +  +I+ N  + N    LNI K  N++ D+  Y  V  
Sbjct: 135 NRYSVIDRIQEQRDMNEAEAFDVNAAIHGNWTIENAKERLNIYKQTNNIRDDYKYTPV-G 193

Query: 103 SEVSRYYNAVVKMKRLVINVRDPSLRQSL 17
            E +RY          + ++ +  LR +L
Sbjct: 194 PEHARYVLPFQLSSACISDLTEYGLRPNL 222


>AF005239-1|AAC23709.1|  460|Drosophila melanogaster DEAD-box
           helicase protein.
          Length = 460

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +3

Query: 357 LQTLVQFYENCKNVKTRYKIINGRFGKISI 446
           L+ + Q+Y  CKN + +Y  I   +G IS+
Sbjct: 285 LENIKQYYVKCKNEEGKYNAIQNIYGCISV 314


>X16969-1|CAA34840.1|  353|Drosophila melanogaster catalytic subunit
           protein.
          Length = 353

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 423 GRFGKISILSHKPTSKLYLQKTI 491
           G FG++ I+ HKPT   Y  K +
Sbjct: 55  GSFGRVMIVQHKPTKDYYAMKIL 77


>M74121-1|AAC41573.1| 1293|Drosophila melanogaster maleless protein
           protein.
          Length = 1293

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -3

Query: 283 NRNNKIDAHQFFERVDTAEAQIIKDSIYDNTVLLNRDVFLNILKFANDVFDNKAY 119
           NR + ID  Q    ++ AEA  +  +I+ N  + N    LNI K  N++ D+  Y
Sbjct: 135 NRYSVIDRIQEQRDMNEAEAFDVNAAIHGNWTIENAKERLNIYKQTNNIRDDYKY 189


>M18655-1|AAA28412.1|  353|Drosophila melanogaster protein (
           D.melanogaster cAMP-dependent protein kinase catalytic
           subunit, complete cds.).
          Length = 353

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 423 GRFGKISILSHKPTSKLYLQKTI 491
           G FG++ I+ HKPT   Y  K +
Sbjct: 55  GSFGRVMIVQHKPTKDYYAMKIL 77


>BT003604-1|AAO39607.1| 1191|Drosophila melanogaster GM01778p
           protein.
          Length = 1191

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/50 (28%), Positives = 26/50 (52%)
 Frame = -3

Query: 217 IKDSIYDNTVLLNRDVFLNILKFANDVFDNKAYMYVDDSEVSRYYNAVVK 68
           ++D I + T  L  D   N+ KF+   +DN++ +   + E  +YY   +K
Sbjct: 335 LEDEISEVTSWLGSDGAENLQKFSQLHWDNESQLRTQEQEFEKYYFIAMK 384


>AY069425-1|AAL39570.1|  353|Drosophila melanogaster LD13640p
           protein.
          Length = 353

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 423 GRFGKISILSHKPTSKLYLQKTI 491
           G FG++ I+ HKPT   Y  K +
Sbjct: 55  GSFGRVMIVQHKPTKDYYAMKIL 77


>AE014134-1676|AAS64669.1|  353|Drosophila melanogaster CG4379-PC,
           isoform C protein.
          Length = 353

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 423 GRFGKISILSHKPTSKLYLQKTI 491
           G FG++ I+ HKPT   Y  K +
Sbjct: 55  GSFGRVMIVQHKPTKDYYAMKIL 77


>AE014134-1675|AAN10703.1|  353|Drosophila melanogaster CG4379-PB,
           isoform B protein.
          Length = 353

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 423 GRFGKISILSHKPTSKLYLQKTI 491
           G FG++ I+ HKPT   Y  K +
Sbjct: 55  GSFGRVMIVQHKPTKDYYAMKIL 77


>AE014134-1674|AAF52797.1|  353|Drosophila melanogaster CG4379-PA,
           isoform A protein.
          Length = 353

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 423 GRFGKISILSHKPTSKLYLQKTI 491
           G FG++ I+ HKPT   Y  K +
Sbjct: 55  GSFGRVMIVQHKPTKDYYAMKIL 77


>AE013599-123|AAF57297.1| 1293|Drosophila melanogaster CG11680-PA,
           isoform A protein.
          Length = 1293

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = -3

Query: 283 NRNNKIDAHQFFERVDTAEAQIIKDSIYDNTVLLNRDVFLNILKFANDVFDNKAY 119
           NR + ID  Q    ++ AEA  +  +I+ N  + N    LNI K  N++ D+  Y
Sbjct: 135 NRYSVIDRIQEQRDMNEAEAFDVNAAIHGNWTIENAKERLNIYKQTNNIRDDYKY 189


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,864,545
Number of Sequences: 53049
Number of extensions: 510368
Number of successful extensions: 2292
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2270
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)