Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15a15
         (455 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical pr...    28   3.7  
M13235-1|AAA28129.1|  552|Caenorhabditis elegans protein ( C.ele...    28   3.7  
Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical pr...    27   4.9  
Z82260-1|CAB05140.1|  332|Caenorhabditis elegans Hypothetical pr...    27   6.5  
U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical pr...    27   6.5  
U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z72505-4|CAA96611.1|  347|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U39849-4|AAA81047.1|  349|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z50806-5|CAB60297.2| 1209|Caenorhabditis elegans Hypothetical
           protein M79.1c protein.
          Length = 1209

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +3

Query: 231 SASVLESATTDCFLELHAIGPPFI----QITKPEVLRLVSGSPAKSESQK 368
           S S    +TT       A GPPF     Q TKP++L+ V  S A+  S++
Sbjct: 624 SVSFFNPSTTSKVTSFRAQGPPFPPPPQQNTKPKLLKSVLNSNARHASEE 673


>Z50806-4|CAB60296.2| 1214|Caenorhabditis elegans Hypothetical
           protein M79.1b protein.
          Length = 1214

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +3

Query: 231 SASVLESATTDCFLELHAIGPPFI----QITKPEVLRLVSGSPAKSESQK 368
           S S    +TT       A GPPF     Q TKP++L+ V  S A+  S++
Sbjct: 629 SVSFFNPSTTSKVTSFRAQGPPFPPPPQQNTKPKLLKSVLNSNARHASEE 678


>Z50806-3|CAA90691.2| 1224|Caenorhabditis elegans Hypothetical
           protein M79.1a protein.
          Length = 1224

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +3

Query: 231 SASVLESATTDCFLELHAIGPPFI----QITKPEVLRLVSGSPAKSESQK 368
           S S    +TT       A GPPF     Q TKP++L+ V  S A+  S++
Sbjct: 639 SVSFFNPSTTSKVTSFRAQGPPFPPPPQQNTKPKLLKSVLNSNARHASEE 688


>M13235-1|AAA28129.1|  552|Caenorhabditis elegans protein (
           C.elegans DNA homologousto the v-abl oncogene. ).
          Length = 552

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
 Frame = +3

Query: 231 SASVLESATTDCFLELHAIGPPFI----QITKPEVLRLVSGSPAKSESQK 368
           S S    +TT       A GPPF     Q TKP++L+ V  S A+  S++
Sbjct: 490 SVSFFNPSTTSKVTSFRAQGPPFPPPPQQNTKPKLLKSVLNSNARHASEE 539


>Z82090-3|CAD98728.1| 1516|Caenorhabditis elegans Hypothetical protein
            ZK337.1c protein.
          Length = 1516

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 436  LRFIKSSKEKGIHYSKGDNILRGFCDSDFAG 344
            ++FI+   ++ + Y + DN    F DSD AG
Sbjct: 1025 IKFIEQGIQRELTYKRADNSFSAFGDSDKAG 1055


>Z82090-2|CAB05007.2| 1501|Caenorhabditis elegans Hypothetical protein
            ZK337.1b protein.
          Length = 1501

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 436  LRFIKSSKEKGIHYSKGDNILRGFCDSDFAG 344
            ++FI+   ++ + Y + DN    F DSD AG
Sbjct: 1028 IKFIEQGIQRELTYKRADNSFSAFGDSDKAG 1058


>Z82090-1|CAB05006.1| 1508|Caenorhabditis elegans Hypothetical protein
            ZK337.1a protein.
          Length = 1508

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 436  LRFIKSSKEKGIHYSKGDNILRGFCDSDFAG 344
            ++FI+   ++ + Y + DN    F DSD AG
Sbjct: 1017 IKFIEQGIQRELTYKRADNSFSAFGDSDKAG 1047


>Z82260-1|CAB05140.1|  332|Caenorhabditis elegans Hypothetical
           protein C32H11.2 protein.
          Length = 332

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 361 HKNLSIYCHLYCNEYLFLLNF 423
           H+N SIYC +  N Y+ LL F
Sbjct: 179 HENCSIYCDILKNSYVGLLIF 199


>U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical
           protein F14B8.5a protein.
          Length = 537

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +1

Query: 304 RSQNQKYFVSCQDHQRNQNHK 366
           ++QNQ + ++ Q+HQ NQNH+
Sbjct: 472 QTQNQNHLIN-QNHQTNQNHQ 491


>U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical
           protein F14B8.5b protein.
          Length = 501

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +1

Query: 304 RSQNQKYFVSCQDHQRNQNHK 366
           ++QNQ + ++ Q+HQ NQNH+
Sbjct: 436 QTQNQNHLIN-QNHQTNQNHQ 455


>Z72505-4|CAA96611.1|  347|Caenorhabditis elegans Hypothetical
           protein C50C10.6 protein.
          Length = 347

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 69  SQRKQLLYAIIIVKITTKCFNVHESSKVFYFSVYNLERSLIY 194
           S +KQL YA+++             S  F F + N+E +L Y
Sbjct: 245 SLQKQLFYALVVQSAIPSVLMYFPISMAFIFPMLNIELNLKY 286


>U39849-4|AAA81047.1|  349|Caenorhabditis elegans Hypothetical
           protein C06A8.6 protein.
          Length = 349

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 15/47 (31%), Positives = 26/47 (55%)
 Frame = -1

Query: 161 EVENFRTFMNIKTFSCYFHYDYSVK*LFSLTKLVNNVLFYPSTKLTK 21
           +VEN  + +N+++    F+    ++ L  LTKL    LF+   K+TK
Sbjct: 90  KVENLDSLVNLESLDLSFNRITKIENLEKLTKL--KTLFFVHNKITK 134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,966,769
Number of Sequences: 27780
Number of extensions: 168585
Number of successful extensions: 644
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)