Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15a09
         (531 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022749-1|AAY55165.1|  674|Drosophila melanogaster IP14655p pro...    29   5.2  
AY089420-1|AAL90158.1|  679|Drosophila melanogaster AT24439p pro...    29   5.2  
AJ243904-1|CAB64937.1|  773|Drosophila melanogaster SF1 protein ...    29   5.2  
AE013599-2845|AAF57589.2|  674|Drosophila melanogaster CG7229-PA...    29   5.2  
BT011331-1|AAR96123.1|  198|Drosophila melanogaster SD18370p pro...    28   6.9  
AE014296-641|AAN11561.1|  198|Drosophila melanogaster CG12013-PC...    28   6.9  

>BT022749-1|AAY55165.1|  674|Drosophila melanogaster IP14655p
           protein.
          Length = 674

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 404 CRRMLE-LRSVTKETLQLTINFYTNMMNLPEYKIPR 508
           CR +L+ L+S+T +T  +T NF++N  +  + K+ R
Sbjct: 168 CRELLKKLQSITNQTDAMTRNFFSNKWDSLQKKVDR 203


>AY089420-1|AAL90158.1|  679|Drosophila melanogaster AT24439p
           protein.
          Length = 679

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 404 CRRMLE-LRSVTKETLQLTINFYTNMMNLPEYKIPR 508
           CR +L+ L+S+T +T  +T NF++N  +  + K+ R
Sbjct: 168 CRELLKKLQSITNQTDAMTRNFFSNKWDSLQKKVDR 203


>AJ243904-1|CAB64937.1|  773|Drosophila melanogaster SF1 protein
           protein.
          Length = 773

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 138 PLPGSSPCSIWPPIGSDARPTR 203
           P+PG+ P  I PP G+ ARP R
Sbjct: 724 PIPGTLPPLIPPPPGTSARPCR 745


>AE013599-2845|AAF57589.2|  674|Drosophila melanogaster CG7229-PA
           protein.
          Length = 674

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 404 CRRMLE-LRSVTKETLQLTINFYTNMMNLPEYKIPR 508
           CR +L+ L+S+T +T  +T NF++N  +  + K+ R
Sbjct: 168 CRELLKKLQSITNQTDAMTRNFFSNKWDSLQKKVDR 203


>BT011331-1|AAR96123.1|  198|Drosophila melanogaster SD18370p
           protein.
          Length = 198

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 16/76 (21%), Positives = 35/76 (46%)
 Frame = -3

Query: 229 LAPQTVVLYLVGRASLPIGGQIEHGLEPGSGLNFYFPRIKIVFVANIKTVHCG*SSLLKT 50
           +A +++V + +G  ++ +G  I   ++     N  +     ++   +K  H    SL K 
Sbjct: 1   MAGRSIVHFFLGSVAIALGSYIYFTMQIDMSANGDYKNAASIYEFTVKDTHGNDVSLEKY 60

Query: 49  KGESVSILSEYCCCSL 2
           KG+ V +++    C L
Sbjct: 61  KGKVVLVVNIASKCGL 76


>AE014296-641|AAN11561.1|  198|Drosophila melanogaster CG12013-PC,
           isoform C protein.
          Length = 198

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 16/76 (21%), Positives = 35/76 (46%)
 Frame = -3

Query: 229 LAPQTVVLYLVGRASLPIGGQIEHGLEPGSGLNFYFPRIKIVFVANIKTVHCG*SSLLKT 50
           +A +++V + +G  ++ +G  I   ++     N  +     ++   +K  H    SL K 
Sbjct: 1   MAGRSIVHFFLGSVAIALGSYIYFTMQIDMSANGDYKNAASIYEFTVKDTHGNDVSLEKY 60

Query: 49  KGESVSILSEYCCCSL 2
           KG+ V +++    C L
Sbjct: 61  KGKVVLVVNIASKCGL 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,543,915
Number of Sequences: 53049
Number of extensions: 528789
Number of successful extensions: 1195
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)