Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15a03
         (524 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK000330-1|BAA91090.1|  567|Homo sapiens protein ( Homo sapiens ...    30   5.7  
U82083-1|AAB82068.1|  877|Homo sapiens metabotropic glutamate re...    29   7.6  
AB065467-1|BAC05726.1| 1520|Homo sapiens seven transmembrane hel...    29   7.6  
BC029819-1|AAH29819.1|  483|Homo sapiens dual oxidase maturation...    29   10.0 

>AK000330-1|BAA91090.1|  567|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20323 fis, clone HEP09648. ).
          Length = 567

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +1

Query: 283 SQKAEKVVNPNRNWNDNTVFDNLS-PWTSVPDFGTVCHTLIGYCVRYNN 426
           SQ    VV PNR  +D TVF+ +S  W+ +      C   +  C    N
Sbjct: 334 SQNRMIVVTPNRTMSDFTVFERISLAWSPITSLMWACGRHLYECTEEEN 382


>U82083-1|AAB82068.1|  877|Homo sapiens metabotropic glutamate
           receptor 6 protein protein.
          Length = 877

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
 Frame = +1

Query: 352 SPWTSVP----DFGTVCHT-LIGYCVRYNNTSDALYQNPELAYNLINGLRII 492
           SPW + P      G V  T ++   VRYNNT        EL+Y L+ G+ +I
Sbjct: 583 SPWAAPPLLLAVLGIVATTTVVATFVRYNNTPIVRASGRELSYVLLTGIFLI 634


>AB065467-1|BAC05726.1| 1520|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 1520

 Score = 29.5 bits (63), Expect = 7.6
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
 Frame = +1

Query: 352 SPWTSVP----DFGTVCHT-LIGYCVRYNNTSDALYQNPELAYNLINGLRII 492
           SPW + P      G V  T ++   VRYNNT        EL+Y L+ G+ +I
Sbjct: 740 SPWAAPPLLLAVLGIVATTTVVATFVRYNNTPIVRASGRELSYVLLTGIFLI 791


>BC029819-1|AAH29819.1|  483|Homo sapiens dual oxidase maturation
           factor 1 protein.
          Length = 483

 Score = 29.1 bits (62), Expect = 10.0
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -2

Query: 463 RPIRGSGITRRWCCCSVRNTL*ACGTRYQSPERLSTDSNCQIPCC 329
           RP+RG G  R W   S      ACG R   P RL ++S  + P C
Sbjct: 408 RPLRGRGTGRLWRWGSKERR--ACGVRAMLP-RLVSNSGLKRPSC 449


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,421,095
Number of Sequences: 237096
Number of extensions: 1093134
Number of successful extensions: 2703
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2703
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)