Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc15a03
         (524 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009996-1|AAQ22465.1| 1483|Drosophila melanogaster RE35509p pro...    29   3.9  
AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-P...    29   3.9  
AE014297-1400|AAS65141.1| 1477|Drosophila melanogaster CG31368-P...    29   3.9  
AE014297-1399|AAF54713.3| 1480|Drosophila melanogaster CG31368-P...    29   3.9  
AE014134-3558|ABI31332.1|  264|Drosophila melanogaster CG41433-P...    28   6.7  
AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-P...    28   8.9  

>BT009996-1|AAQ22465.1| 1483|Drosophila melanogaster RE35509p
           protein.
          Length = 1483

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 17/69 (24%), Positives = 33/69 (47%)
 Frame = +1

Query: 214 QQNNIQELENFEQWFKNNLSYSFSQKAEKVVNPNRNWNDNTVFDNLSPWTSVPDFGTVCH 393
           ++  ++E+  + +++K  L      K E  V   R++  N + D L    S+P  G V  
Sbjct: 201 REQELREVPEWRKYWKRLLKKEKDSKPE--VLWERHFMQNLIIDFLHILESIPAEGEVPR 258

Query: 394 TLIGYCVRY 420
            ++ YC R+
Sbjct: 259 NVVHYCERF 267


>AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-PA
            protein.
          Length = 1895

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = +1

Query: 172  NTFDITNDDSIVAFQQNNIQELENFEQWFKNNLSYSFSQKAEKVVNPNRNWNDN 333
            N     N ++I +  QNN   +++  Q  +NN+      K + + + N+N N N
Sbjct: 1824 NNIQSKNQNNIQSKNQNNQNNIQSKNQNNQNNMQSKNQNKNQNIQSKNQNNNQN 1877


>AE014297-1400|AAS65141.1| 1477|Drosophila melanogaster CG31368-PB,
           isoform B protein.
          Length = 1477

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 17/69 (24%), Positives = 33/69 (47%)
 Frame = +1

Query: 214 QQNNIQELENFEQWFKNNLSYSFSQKAEKVVNPNRNWNDNTVFDNLSPWTSVPDFGTVCH 393
           ++  ++E+  + +++K  L      K E  V   R++  N + D L    S+P  G V  
Sbjct: 201 REQELREVPEWRKYWKRLLKKEKDSKPE--VLWERHFMQNLIIDFLHILESIPAEGEVPR 258

Query: 394 TLIGYCVRY 420
            ++ YC R+
Sbjct: 259 NVVHYCERF 267


>AE014297-1399|AAF54713.3| 1480|Drosophila melanogaster CG31368-PA,
           isoform A protein.
          Length = 1480

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 17/69 (24%), Positives = 33/69 (47%)
 Frame = +1

Query: 214 QQNNIQELENFEQWFKNNLSYSFSQKAEKVVNPNRNWNDNTVFDNLSPWTSVPDFGTVCH 393
           ++  ++E+  + +++K  L      K E  V   R++  N + D L    S+P  G V  
Sbjct: 201 REQELREVPEWRKYWKRLLKKEKDSKPE--VLWERHFMQNLIIDFLHILESIPAEGEVPR 258

Query: 394 TLIGYCVRY 420
            ++ YC R+
Sbjct: 259 NVVHYCERF 267


>AE014134-3558|ABI31332.1|  264|Drosophila melanogaster CG41433-PA
           protein.
          Length = 264

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 354 SVDKRSGLWYRVPHAHR 404
           S+ + SG W+R+PH HR
Sbjct: 115 SLCRASGFWFRLPHPHR 131


>AE014134-2469|AAS64704.1| 1853|Drosophila melanogaster CG32972-PA,
            isoform A protein.
          Length = 1853

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 140  SIPCRSMPLISIPLISPTTT 199
            SIPC+  P + I L+S TTT
Sbjct: 1308 SIPCKDFPYLPICLVSTTTT 1327


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,334,173
Number of Sequences: 53049
Number of extensions: 368801
Number of successful extensions: 1025
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1949978112
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)