Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14p23
(406 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1324 - 25825153-25825197,25825705-25825785,25825907-258259... 114 2e-26
06_01_0718 + 5233030-5233062,5233329-5233383,5233543-5233660,523... 110 5e-25
06_01_0067 + 561910-561987,562698-562759,564293-564338,564701-56... 108 2e-24
04_01_0026 - 354855-354876,355184-355248,355710-355817,356215-35... 107 4e-24
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 105 1e-23
08_01_0066 - 455589-455687,455902-455976,456531-456677,457158-45... 82 2e-16
08_02_0034 - 11435678-11435702,11435787-11435816,11436364-114365... 79 1e-15
04_04_1543 - 34270578-34270718,34271069-34271341,34271782-342719... 66 8e-12
11_03_0227 + 11934530-11934638,11937206-11937351,11937492-119376... 64 4e-11
03_01_0215 + 1696250-1696573,1697653-1697793,1698267-1698539,169... 62 2e-10
12_01_0813 + 7475591-7475693,7476972-7477117,7477205-7477324,747... 61 3e-10
08_01_0130 + 1040696-1041049,1042135-1042275,1042422-1042673,104... 48 3e-06
07_03_0057 + 12872946-12873152,12873371-12873421,12876335-128764... 44 5e-05
10_07_0081 - 12716130-12716271,12716367-12716449,12716729-127167... 30 0.61
06_01_0598 + 4324129-4326150 28 2.4
01_05_0703 - 24404580-24406373 28 3.2
11_03_0215 + 11809068-11809300,11809872-11809964,11810976-118111... 27 4.3
07_03_1451 - 26623913-26624123,26624504-26624593,26624691-266249... 27 4.3
11_08_0091 - 28303446-28303732,28303825-28304297,28304383-283045... 27 5.6
03_05_1091 + 30322035-30322739,30322861-30324043,30324114-303251... 27 5.6
03_03_0062 + 14170303-14170637,14171799-14172029,14172224-141723... 27 5.6
06_02_0263 - 13566621-13569875 27 7.5
04_03_0424 + 15786147-15786213,15786751-15787037 27 7.5
03_03_0015 - 13755971-13756957 26 9.9
>07_03_1324 -
25825153-25825197,25825705-25825785,25825907-25825967,
25826005-25826060,25826171-25826239,25826366-25826473,
25826555-25826635,25826795-25826951,25827060-25827177,
25827285-25827339,25827779-25827814
Length = 288
Score = 114 bits (275), Expect = 2e-26
Identities = 56/91 (61%), Positives = 68/91 (74%)
Frame = +3
Query: 78 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 257
VVFVLG PGSGKGTQC+ I + + + HLSAGDLLR E + GSE G MIE I+ G+IVP
Sbjct: 26 VVFVLGGPGSGKGTQCANIVEHFGFTHLSAGDLLRAEI-KSGSENGTMIENMIKEGKIVP 84
Query: 258 VEVTCSLLHKAMQKSGKERFLIDGFPRNQDN 350
EVT LL AM K+ ++FLIDGFPRN++N
Sbjct: 85 SEVTIKLLQDAMIKNENDKFLIDGFPRNEEN 115
>06_01_0718 +
5233030-5233062,5233329-5233383,5233543-5233660,
5233746-5233902,5234033-5234113,5234213-5234320,
5234448-5234483
Length = 195
Score = 110 bits (264), Expect = 5e-25
Identities = 50/92 (54%), Positives = 69/92 (75%)
Frame = +3
Query: 75 QVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIV 254
+++FVLG PGSGKGTQCS I + + ++HLSAG+LLR E GSE G MI+ I G+IV
Sbjct: 24 KIIFVLGGPGSGKGTQCSNIVEHFGFIHLSAGELLRAEINS-GSENGTMIDTIITEGKIV 82
Query: 255 PVEVTCSLLHKAMQKSGKERFLIDGFPRNQDN 350
P E+T LL +A+ K G ++++IDGFPRN++N
Sbjct: 83 PSEITIKLLQEAIIKGGNDKYIIDGFPRNEEN 114
>06_01_0067 +
561910-561987,562698-562759,564293-564338,564701-564758,
564892-565009,565130-565286,565611-565718,565884-565955,
566058-566174,566309-566404
Length = 303
Score = 108 bits (259), Expect = 2e-24
Identities = 48/91 (52%), Positives = 69/91 (75%)
Frame = +3
Query: 78 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 257
+VFV+G PGSGKGTQC+ I K++ + HLSAGDLLREE + +E G MI+ + G++V
Sbjct: 77 IVFVIGGPGSGKGTQCAKIVKQFGFTHLSAGDLLREE-AKYDTEQGTMIKNLMNEGKLVS 135
Query: 258 VEVTCSLLHKAMQKSGKERFLIDGFPRNQDN 350
++ LL KAM++SG ++FL+DGFPRN++N
Sbjct: 136 SDLIVKLLFKAMRESGNDKFLVDGFPRNEEN 166
>04_01_0026 -
354855-354876,355184-355248,355710-355817,356215-356295,
356729-356885,356990-357107,357485-357533,357806-357901
Length = 231
Score = 107 bits (256), Expect = 4e-24
Identities = 51/93 (54%), Positives = 65/93 (69%)
Frame = +3
Query: 72 PQVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEI 251
P + FVLG PGSGKGTQC I+ ++ + HLSAGDLLR E G E GE+I I+ G+I
Sbjct: 42 PFIAFVLGGPGSGKGTQCVRIASDFGFAHLSAGDLLRSEIS-TGGEKGELILNIIKEGKI 100
Query: 252 VPVEVTCSLLHKAMQKSGKERFLIDGFPRNQDN 350
VP E+T L+ KAM+ S +R LIDGFPR ++N
Sbjct: 101 VPSEITVELIRKAMESSDAKRVLIDGFPRCEEN 133
>02_05_0942 +
32970537-32970581,32971059-32971113,32971300-32971417,
32971567-32971615,32971637-32971723,32971890-32971970,
32972074-32972181,32972432-32972503,32973218-32973250
Length = 215
Score = 105 bits (252), Expect = 1e-23
Identities = 54/91 (59%), Positives = 67/91 (73%)
Frame = +3
Query: 78 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 257
VVFVLG PGSGKGTQC+ I + + ++HLSAGDLLR E + GSE G MIE I+ G+IVP
Sbjct: 29 VVFVLGGPGSGKGTQCANIVEHFGFIHLSAGDLLRAE-IKSGSENGTMIENMIKEGKIVP 87
Query: 258 VEVTCSLLHKAMQKSGKERFLIDGFPRNQDN 350
E +AM KSG ++FLIDGFPRN++N
Sbjct: 88 SE-------EAMIKSGNDKFLIDGFPRNEEN 111
>08_01_0066 -
455589-455687,455902-455976,456531-456677,457158-457292,
457380-457508,457719-457814,458212-458403
Length = 290
Score = 81.8 bits (193), Expect = 2e-16
Identities = 41/95 (43%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +3
Query: 63 KMVPQVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRN 242
K P V + GAP SGKGTQC +I +Y VH+SAGDLLR E GSE G+ +E +
Sbjct: 70 KADPLKVMIAGAPASGKGTQCELIKSKYGLVHISAGDLLRAE-IAAGSENGKRAKEFMEK 128
Query: 243 GEIVPVEVTCSLL-HKAMQKSGKER-FLIDGFPRN 341
G++VP E+ +++ + +Q +E+ +L+DG+PR+
Sbjct: 129 GQLVPDEIVVNMVKERLLQPDAQEKGWLLDGYPRS 163
>08_02_0034 -
11435678-11435702,11435787-11435816,11436364-11436501,
11436646-11436755,11436838-11436867,11437948-11437993,
11438453-11438622,11439156-11439221,11439299-11439378,
11440704-11440842,11440933-11441013,11441112-11441147,
11441414-11441539,11442084-11442179,11443615-11443689,
11444288-11444434,11445155-11445229,11445485-11445619,
11445706-11445834,11446161-11446292,11446395-11446598
Length = 689
Score = 79.0 bits (186), Expect = 1e-15
Identities = 43/95 (45%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +3
Query: 63 KMVPQVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRN 242
K P V + GAP SGKGTQC MI ++Y VH+S GDLLR E G+E G+ +E + N
Sbjct: 86 KEAPLKVMISGAPASGKGTQCRMIVEKYGLVHISTGDLLRAE-VSSGTEIGKKAKEYMDN 144
Query: 243 GEIVPVE-VTCSLLHKAMQKSGKER-FLIDGFPRN 341
G +VP + VT ++ + Q +ER +L+DG+PR+
Sbjct: 145 GMLVPDQVVTDMVVSRLSQPDVRERGWLLDGYPRS 179
>04_04_1543 -
34270578-34270718,34271069-34271341,34271782-34271922,
34272365-34272667
Length = 285
Score = 66.5 bits (155), Expect = 8e-12
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Frame = +3
Query: 75 QVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIV 254
Q VF LG PG GKGT S +S+ H++ GDL+R+ PG + E + E + NG++V
Sbjct: 55 QWVF-LGCPGVGKGTYASRLSQMLRVPHIATGDLVRDALASPG-PFSEQLAEIVNNGKLV 112
Query: 255 PVEVTCSLLHKAMQ---KSGKERFLIDGFPR 338
E+ +LL K ++ + G+ F++DGFPR
Sbjct: 113 SDEIIINLLSKRLEEGAEKGELGFILDGFPR 143
>11_03_0227 +
11934530-11934638,11937206-11937351,11937492-11937611,
11937731-11937898,11938534-11938623,11938920-11939018
Length = 243
Score = 64.1 bits (149), Expect = 4e-11
Identities = 38/107 (35%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Frame = +3
Query: 21 MLNSVLRQSSRYINKMVPQVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRP 200
++N +LR+ + +K +++ V G PGSGKGTQ +I EY HL+ GD+LR
Sbjct: 15 LMNELLRRM-KCSSKPDKRLILV-GPPGSGKGTQSPIIKDEYCLCHLATGDMLR-AAVAA 71
Query: 201 GSEYGEMIEEKIRNGEIVPVEVTCSLLHKAMQK-SGKERFLIDGFPR 338
+ G +E + GE+V ++ ++ +AM+K S ++ F++DGFPR
Sbjct: 72 KTPLGVKAKEAMDKGELVSDDLVVGIIDEAMKKPSCQKGFILDGFPR 118
>03_01_0215 +
1696250-1696573,1697653-1697793,1698267-1698539,
1698755-1698814,1698890-1699033
Length = 313
Score = 62.1 bits (144), Expect = 2e-10
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Frame = +3
Query: 39 RQSSRYINKMVPQVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGE 218
R R + Q VF LG PG GKGT S +S+ H++ GDL+R+E G
Sbjct: 50 RARQRVAEERNVQWVF-LGCPGVGKGTYASRLSRLLGVPHIATGDLVRDELASSG-PLSV 107
Query: 219 MIEEKIRNGEIVPVEVTCSLLHKAMQK---SGKERFLIDGFPR 338
+ E + G++V E+ +LL K ++K G+ F++DGFPR
Sbjct: 108 QLAEIVNQGKLVSDEIIINLLSKRLKKGEEQGESGFILDGFPR 150
>12_01_0813 +
7475591-7475693,7476972-7477117,7477205-7477324,
7477445-7477612,7478252-7478341,7478941-7479039
Length = 241
Score = 61.3 bits (142), Expect = 3e-10
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +3
Query: 81 VFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVPV 260
V ++G PG GKGTQ +I E+ HL+ GD+LR + G +E + GE+V
Sbjct: 31 VILVGPPGCGKGTQSPLIKDEFCLCHLATGDMLR-AAVAAKTPLGIKAKEAMDKGELVSD 89
Query: 261 EVTCSLLHKAMQKSGKER-FLIDGFPR 338
++ ++ +AM+K+ ++ F++DGFPR
Sbjct: 90 DLVVGIIDEAMKKTSCQKGFILDGFPR 116
>08_01_0130 +
1040696-1041049,1042135-1042275,1042422-1042673,
1043797-1043904,1044289-1044593,1044720-1044841,
1044979-1045225,1045308-1045365,1045414-1045530,
1045718-1045753,1046492-1046554,1046958-1047047,
1047241-1047399,1047475-1047596,1048145-1048217,
1048307-1048375
Length = 771
Score = 48.0 bits (109), Expect = 3e-06
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Frame = +3
Query: 72 PQVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEI 251
PQ V V+G PG K + +++ ++S G L+R+E P S + I + G++
Sbjct: 71 PQWV-VMGRPGPQKHAHAARLAEVLAVPYISMGTLVRQELS-PASSLYKKIANSVNEGKL 128
Query: 252 VPVEVTCSLLHKAMQK---SGKERFLIDGFPR 338
VP ++ LL K +++ G+ F++DG PR
Sbjct: 129 VPEDIIFGLLTKRLEEGYNKGETGFILDGIPR 160
>07_03_0057 +
12872946-12873152,12873371-12873421,12876335-12876480,
12876567-12876756
Length = 197
Score = 44.0 bits (99), Expect = 5e-05
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +3
Query: 81 VFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEI 251
V V G PG+GK T CS+++ D H++ GDL+RE+ G + E +E I N ++
Sbjct: 15 VLVTGTPGTGKTTTCSLLADAVDLRHINIGDLVREKSLHDG--WDEELECHIINEDL 69
>10_07_0081 -
12716130-12716271,12716367-12716449,12716729-12716785,
12716886-12716942,12717014-12717113,12717204-12717274,
12718284-12718460,12719142-12719312,12722151-12722234,
12722310-12722354,12722447-12722537,12722745-12722863,
12723213-12723434,12723630-12723854,12725366-12725571,
12726081-12726258,12726702-12726762,12727930-12728039,
12728126-12728257,12729136-12729208,12729608-12729645,
12730373-12730474,12730565-12730622,12731071-12731172,
12731240-12731386,12732023-12732159,12732256-12732405,
12733103-12733259,12733615-12733673,12733982-12734138,
12734209-12734354,12739177-12739320,12739478-12739606
Length = 1309
Score = 30.3 bits (65), Expect = 0.61
Identities = 10/44 (22%), Positives = 24/44 (54%)
Frame = -2
Query: 243 RYEFFLQSFLRILNQASGVLLEVNRLHSNGHNHILWKSLSTVYL 112
RY +Q L++ N + +++V +H N ++H+ + + Y+
Sbjct: 741 RYMLAIQKLLQLKNNKAATIIQVQSMHQNIYSHVAYTVKTMFYI 784
>06_01_0598 + 4324129-4326150
Length = 673
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 210 YGEMIEEKIRNGEIVPVEVTCSLLHKAMQKSGKERF 317
+ EM++E I E+V + + H M +GKE F
Sbjct: 514 FNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYF 549
>01_05_0703 - 24404580-24406373
Length = 597
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 75 QVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIV 254
+VV ++G G+GK T S+++ D + AG++L R + + + ++ +
Sbjct: 63 EVVAIVGPSGAGKTTLLSVLAGSADPARVVAGEVLVNGRAMDAARFRRVSGHVPQDDALF 122
Query: 255 P-VEVTCSLLHKA 290
P + V SL++ A
Sbjct: 123 PMLTVEESLVYSA 135
>11_03_0215 +
11809068-11809300,11809872-11809964,11810976-11811193,
11812780-11812832,11813411-11813527,11814817-11814908,
11815672-11815758,11816625-11816742
Length = 336
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +3
Query: 78 VVFVLGAPGSGKGTQCSMISKEYDYVHLSA 167
VV V+G GSGK TQ S I Y A
Sbjct: 33 VVVVIGETGSGKSTQLSQILHRRGYTRRGA 62
>07_03_1451 -
26623913-26624123,26624504-26624593,26624691-26624920,
26625692-26625794,26625908-26626150,26626263-26626352,
26626537-26626808
Length = 412
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 129 MISKEYDYVHLSAGDLLREERQRPGSE 209
+I +YD +H+ GDLL+ + R G E
Sbjct: 239 VILGDYDAIHVRRGDLLKNRKDRFGVE 265
>11_08_0091 -
28303446-28303732,28303825-28304297,28304383-28304574,
28304688-28304986,28305086-28305121
Length = 428
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 60 NKMVPQVVFVLGAPGSGKGTQCSMISKE--YDYVHLSAGDL 176
N VP ++ + G G GK QC ++ + + + +SAG+L
Sbjct: 145 NIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 185
>03_05_1091 +
30322035-30322739,30322861-30324043,30324114-30325105,
30326409-30326798,30326896-30330060
Length = 2144
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 90 LGAPGSGKGTQCSMISKEYDYVHLS 164
+ PGSG G + S++YDYV S
Sbjct: 1 MAKPGSGGGAEAHARSRKYDYVENS 25
>03_03_0062 +
14170303-14170637,14171799-14172029,14172224-14172326,
14173284-14173513,14174258-14174456
Length = 365
Score = 27.1 bits (57), Expect = 5.6
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +3
Query: 141 EYDYVHLSAGDLLREERQRPGSE 209
+YD +H+ GDLL+ + R G E
Sbjct: 230 DYDAIHVRRGDLLKNRKDRFGVE 252
>06_02_0263 - 13566621-13569875
Length = 1084
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 75 QVVFVLGAPGSGKGTQCSMISKEYDYV 155
QV+ V+G GSGK TQ + E Y+
Sbjct: 448 QVLVVIGETGSGKTTQVTQYLAEAGYI 474
>04_03_0424 + 15786147-15786213,15786751-15787037
Length = 117
Score = 26.6 bits (56), Expect = 7.5
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -1
Query: 310 SLPDFCMALCNKEHVTSTGTISPLRIFSSIISPYSEPGLWRSSRS 176
S+ D C ++ N++ +G+ S R SSIIS SE RS RS
Sbjct: 18 SIFDKCSSIWNEDSAVESGSDSTCRGSSSIIST-SETASLRSLRS 61
>03_03_0015 - 13755971-13756957
Length = 328
Score = 26.2 bits (55), Expect = 9.9
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 72 PQVVFVLGAPGSGKGTQCSMISKEYD 149
P+V+FVLGA +GK ++ +D
Sbjct: 18 PKVIFVLGATATGKSKLAIRLAARFD 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,225,299
Number of Sequences: 37544
Number of extensions: 262525
Number of successful extensions: 737
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 706675332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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