Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14p23
(406 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical pr... 136 6e-33
Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical pr... 129 6e-31
Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical pr... 85 2e-17
AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kin... 85 2e-17
L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical p... 73 1e-13
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 60 8e-10
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 60 8e-10
Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z68342-6|CAD89740.1| 418|Caenorhabditis elegans Hypothetical pr... 35 0.019
Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical pr... 35 0.019
Z54271-5|CAA91035.2| 407|Caenorhabditis elegans Hypothetical pr... 31 0.31
AF292046-1|AAG41142.1| 407|Caenorhabditis elegans polynucleotid... 31 0.31
U21317-8|AAA62528.1| 267|Caenorhabditis elegans Hypothetical pr... 30 0.55
Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical pr... 29 0.96
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 27 3.9
Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 27 5.1
U97196-2|AAB52461.2| 268|Caenorhabditis elegans Hypothetical pr... 27 5.1
AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotei... 27 5.1
Z69385-7|CAA93429.2| 508|Caenorhabditis elegans Hypothetical pr... 27 6.8
U41746-8|AAO25991.1| 430|Caenorhabditis elegans Hypothetical pr... 27 6.8
U41746-7|AAK71873.1| 803|Caenorhabditis elegans Hypothetical pr... 27 6.8
AL033514-15|CAA22102.1| 272|Caenorhabditis elegans Hypothetical... 27 6.8
>Z69302-1|CAA93264.1| 191|Caenorhabditis elegans Hypothetical
protein F40F8.1 protein.
Length = 191
Score = 136 bits (329), Expect = 6e-33
Identities = 64/96 (66%), Positives = 76/96 (79%), Gaps = 2/96 (2%)
Frame = +3
Query: 78 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 257
VVFVLG PGSGKGT C+ I + +YVHLSAGDLLR ERQR GSE+G +IE I+NG IVP
Sbjct: 4 VVFVLGPPGSGKGTICAKIQENLNYVHLSAGDLLRAERQREGSEFGALIESHIKNGSIVP 63
Query: 258 VEVTCSLLHKAMQKSGKER-FLIDGFPRNQDNM-GW 359
VE+TCSLL AM+ G + FL+DGFPRN+DN+ GW
Sbjct: 64 VEITCSLLENAMKACGDAKGFLVDGFPRNEDNLQGW 99
>Z92827-3|CAB07328.1| 191|Caenorhabditis elegans Hypothetical
protein C29F7.3 protein.
Length = 191
Score = 129 bits (312), Expect = 6e-31
Identities = 64/96 (66%), Positives = 72/96 (75%), Gaps = 2/96 (2%)
Frame = +3
Query: 78 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 257
VVFVLG PGSGKGT C+ I + YVHLSAGDLLR ER+R GSEYG +IE I+NG IVP
Sbjct: 4 VVFVLGPPGSGKGTICTQIHENLGYVHLSAGDLLRAERERAGSEYGALIEGHIKNGSIVP 63
Query: 258 VEVTCSLLHKAMQKS-GKERFLIDGFPRNQDN-MGW 359
VE+TC+LL AM S FLIDGFPRN+DN GW
Sbjct: 64 VEITCALLENAMIASKDANGFLIDGFPRNEDNWSGW 99
>Z50045-3|CAA90364.1| 210|Caenorhabditis elegans Hypothetical
protein F38B2.4 protein.
Length = 210
Score = 85.0 bits (201), Expect = 2e-17
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Frame = +3
Query: 78 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 257
+ F++G PGSGKGTQC I +Y HLS+GDLLR+E + GS G + + +G +VP
Sbjct: 22 IFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDE-VKSGSPRGAQLTAIMESGALVP 80
Query: 258 VEVTCSLLHKAMQKS---GKERFLIDGFPR 338
+EV L+ +AM K+ G + FLIDG+PR
Sbjct: 81 LEVVLDLVKEAMLKAIEKGSKGFLIDGYPR 110
>AF304123-1|AAG50236.1| 210|Caenorhabditis elegans adenylate kinase
1 protein.
Length = 210
Score = 85.0 bits (201), Expect = 2e-17
Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Frame = +3
Query: 78 VVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVP 257
+ F++G PGSGKGTQC I +Y HLS+GDLLR+E + GS G + + +G +VP
Sbjct: 22 IFFIVGGPGSGKGTQCDKIVAKYGLTHLSSGDLLRDE-VKSGSPRGAQLTAIMESGALVP 80
Query: 258 VEVTCSLLHKAMQKS---GKERFLIDGFPR 338
+EV L+ +AM K+ G + FLIDG+PR
Sbjct: 81 LEVVLDLVKEAMLKAIEKGSKGFLIDGYPR 110
>L23651-13|AAA27957.3| 251|Caenorhabditis elegans Hypothetical
protein C29E4.8 protein.
Length = 251
Score = 72.5 bits (170), Expect = 1e-13
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +3
Query: 90 LGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEIVPVEVT 269
+G PGSGKGTQ +++Y HL+ GDLLR E GSE+G+ ++ + G++V EV
Sbjct: 32 IGPPGSGKGTQAPAFAQKYFSCHLATGDLLRAE-VASGSEFGKELKATMDAGKLVSDEVV 90
Query: 270 CSLLHKAMQK-SGKERFLIDGFPR 338
C L+ + ++K K F++DGFPR
Sbjct: 91 CKLIEQKLEKPECKYGFILDGFPR 114
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 59.7 bits (138), Expect = 8e-10
Identities = 32/110 (29%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Frame = +3
Query: 78 VVFVLGAPGSGKGTQCSMISKEYD-YVHLSAGDLLREE-RQRPGSEYGEMIEEKIRNGEI 251
V+ VLGAPGS K I+++YD + LS GD+LR++ E + + +K+ NG+
Sbjct: 515 VILVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDP 574
Query: 252 VPVEVTCSLLHKAMQKSGKER--FLIDGFPRNQDNMGWLGARHGPDKTKL 395
+P ++ ++L++ + G ++I+G+P++ D + + H +T L
Sbjct: 575 IPTKMCRTVLYEELHSRGTSNWGYVIEGYPKSPDQL--VDLEHSLQRTDL 622
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 59.7 bits (138), Expect = 8e-10
Identities = 32/110 (29%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Frame = +3
Query: 78 VVFVLGAPGSGKGTQCSMISKEYD-YVHLSAGDLLREE-RQRPGSEYGEMIEEKIRNGEI 251
V+ VLGAPGS K I+++YD + LS GD+LR++ E + + +K+ NG+
Sbjct: 515 VILVLGAPGSQKNDISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDP 574
Query: 252 VPVEVTCSLLHKAMQKSGKER--FLIDGFPRNQDNMGWLGARHGPDKTKL 395
+P ++ ++L++ + G ++I+G+P++ D + + H +T L
Sbjct: 575 IPTKMCRTVLYEELHSRGTSNWGYVIEGYPKSPDQL--VDLEHSLQRTDL 622
>Z48585-2|CAA88479.1| 222|Caenorhabditis elegans Hypothetical
protein ZK673.2 protein.
Length = 222
Score = 58.0 bits (134), Expect = 2e-09
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Frame = +3
Query: 81 VFVLGAPGSGKGTQCSMISKEYD---YVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEI 251
V + GA GSGKGT M+ +E++ + + +AGD +R+ R G+E+G + + GE
Sbjct: 4 VLLSGAAGSGKGTIARMLVREFEPLGFNYFAAGDFIRDHIAR-GTEFGVRAQSFLNKGEH 62
Query: 252 VPVEVTCSLLHKAMQKSGKERFLIDGFPRNQDNM 353
VP + + M K+G R ++DG+PRN +
Sbjct: 63 VPDSILNGAILAEMLKAG-PRVVLDGYPRNMSQL 95
>Z68342-6|CAD89740.1| 418|Caenorhabditis elegans Hypothetical
protein F38E11.6b protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.019
Identities = 19/98 (19%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Frame = +3
Query: 54 YINKMVPQVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLRE---ERQRPGSEYGEMI 224
++ K +VF+ G P S KG+ ++ +++ +S D++ + R + I
Sbjct: 36 HLQKNPIAIVFIFGGPASQKGSIIEELTSSFNFTSISVEDIVFQYFPSRLSGSGTQIKDI 95
Query: 225 EEKIRNGE-IVPVEVTCSLLHKAMQKSGKERFLIDGFP 335
++ +RN E ++ ++ ++ ++ + +RF++D P
Sbjct: 96 QDALRNDEGMLSIDWVLEMISSRIKMTMNQRFVVDIVP 133
>Z68342-5|CAA92774.2| 416|Caenorhabditis elegans Hypothetical
protein F38E11.6a protein.
Length = 416
Score = 35.1 bits (77), Expect = 0.019
Identities = 19/98 (19%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Frame = +3
Query: 54 YINKMVPQVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLRE---ERQRPGSEYGEMI 224
++ K +VF+ G P S KG+ ++ +++ +S D++ + R + I
Sbjct: 36 HLQKNPIAIVFIFGGPASQKGSIIEELTSSFNFTSISVEDIVFQYFPSRLSGSGTQIKDI 95
Query: 225 EEKIRNGE-IVPVEVTCSLLHKAMQKSGKERFLIDGFP 335
++ +RN E ++ ++ ++ ++ + +RF++D P
Sbjct: 96 QDALRNDEGMLSIDWVLEMISSRIKMTMNQRFVVDIVP 133
>Z54271-5|CAA91035.2| 407|Caenorhabditis elegans Hypothetical
protein F21D5.5 protein.
Length = 407
Score = 31.1 bits (67), Expect = 0.31
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 75 QVVFVLGAPGSGKGTQCSMISKEYDY 152
+++ ++G PGSGK T M+ ++DY
Sbjct: 251 EIILMVGFPGSGKSTFAKMLGHQHDY 276
>AF292046-1|AAG41142.1| 407|Caenorhabditis elegans polynucleotide
kinase 3' phosphataseprotein.
Length = 407
Score = 31.1 bits (67), Expect = 0.31
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 75 QVVFVLGAPGSGKGTQCSMISKEYDY 152
+++ ++G PGSGK T M+ ++DY
Sbjct: 251 EIILMVGFPGSGKSTFAKMLGHQHDY 276
>U21317-8|AAA62528.1| 267|Caenorhabditis elegans Hypothetical
protein B0495.9 protein.
Length = 267
Score = 30.3 bits (65), Expect = 0.55
Identities = 28/106 (26%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Frame = +3
Query: 81 VFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKIRNGEI--- 251
++VL G T M+S+ + SA L E+ RPG I++ +++GE+
Sbjct: 101 IYVLAVAGLSFVTSFIMLSQMFTGDRNSADGLTNEDFTRPGIPMKTFIDKYLKHGEVQRI 160
Query: 252 --VPVEV-TCSLLHKAMQKSGK---ERFLIDGFPRNQDNMGWLGAR 371
VP ++LH+ GK E +I +P+N W R
Sbjct: 161 VFVPNNSRAIAILHRGAVIDGKAASEASVIVEYPQNAQQF-WADVR 205
>Z50756-1|CAA90637.2| 737|Caenorhabditis elegans Hypothetical
protein T08D10.2 protein.
Length = 737
Score = 29.5 bits (63), Expect = 0.96
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +3
Query: 57 INKMVPQVVFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSEYGEMIEEKI 236
+N M + V V+GA +G +++ +D + A L + S++GE+IE
Sbjct: 169 VNNMEKKFVVVIGAGAAGIAAATQLLTFGFDVAVVEASGLTGGRVRSLISKHGELIETGC 228
Query: 237 RNGEIVPVEVTCSLLHK 287
+ + V +LLH+
Sbjct: 229 DSLRNLDESVITTLLHQ 245
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 240 NGEIVPVEVTCSLLHK-AMQKSGKERFLIDGFPRNQDNMGWLGARHG 377
N E+V ++ TC ++H+ + + KE+ LI P Q + A +G
Sbjct: 264 NNELVMIDTTCRVIHRERIPIADKEKTLIPNPPPTQKLTAFTWAHNG 310
>Z67882-1|CAA91801.1| 1327|Caenorhabditis elegans Hypothetical protein
F22E10.3 protein.
Length = 1327
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 75 QVVFVLGAPGSGKGTQCSMISKEYD 149
Q V ++G GSGK T M+ + YD
Sbjct: 1115 QTVALVGPSGSGKSTNIGMLERFYD 1139
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 27.1 bits (57), Expect = 5.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 81 VFVLGAPGSGKGTQCSMISKEYDYVHLSAGDLLRE 185
+ V G+PG+GK T ++++ +V + +RE
Sbjct: 12 ILVTGSPGTGKSTLGQQVAEKLGFVFIEVSKEVRE 46
>U97196-2|AAB52461.2| 268|Caenorhabditis elegans Hypothetical
protein B0207.6 protein.
Length = 268
Score = 27.1 bits (57), Expect = 5.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 81 VFVLGAPGSGKGTQCS 128
V V+GAPG+GK T C+
Sbjct: 4 VLVIGAPGAGKSTFCA 19
>AY519858-1|AAR89639.1| 1327|Caenorhabditis elegans P-glycoprotein
related (146.8 kD)(pgp-14) protein.
Length = 1327
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 75 QVVFVLGAPGSGKGTQCSMISKEYD 149
Q V ++G GSGK T M+ + YD
Sbjct: 1115 QTVALVGPSGSGKSTNIGMLERFYD 1139
>Z69385-7|CAA93429.2| 508|Caenorhabditis elegans Hypothetical
protein ZK593.8 protein.
Length = 508
Score = 26.6 bits (56), Expect = 6.8
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +3
Query: 87 VLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGS----EYGEMIEEKIRNGEIV 254
V+G + + CS++SKE+D +S D+L R+ G+ E G + ++ G
Sbjct: 304 VIGMDAALRFLNCSLLSKEHD--EISIDDILEMHRRVLGNADPVEAGRIRTTQVYVGRFT 361
Query: 255 PV 260
PV
Sbjct: 362 PV 363
>U41746-8|AAO25991.1| 430|Caenorhabditis elegans Hypothetical
protein T18H9.7c protein.
Length = 430
Score = 26.6 bits (56), Expect = 6.8
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = -1
Query: 388 VLSGP*RAPSHPILS*LRGKPSMRKRSLPDFCMALCNKEHVTSTGTISPLRIFSSIISPY 209
+L GP + P S +R S + +FC + + +T G I ++FS ++ Y
Sbjct: 55 ILGGPVPIVNCPSFSQVRQTLSHVINRIQNFCHSNSSNPPLTIVGIIGTDKLFSQVVKAY 114
Query: 208 SE 203
E
Sbjct: 115 VE 116
>U41746-7|AAK71873.1| 803|Caenorhabditis elegans Hypothetical
protein T18H9.7a protein.
Length = 803
Score = 26.6 bits (56), Expect = 6.8
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = -1
Query: 388 VLSGP*RAPSHPILS*LRGKPSMRKRSLPDFCMALCNKEHVTSTGTISPLRIFSSIISPY 209
+L GP + P S +R S + +FC + + +T G I ++FS ++ Y
Sbjct: 428 ILGGPVPIVNCPSFSQVRQTLSHVINRIQNFCHSNSSNPPLTIVGIIGTDKLFSQVVKAY 487
Query: 208 SE 203
E
Sbjct: 488 VE 489
>AL033514-15|CAA22102.1| 272|Caenorhabditis elegans Hypothetical
protein Y75B8A.14 protein.
Length = 272
Score = 26.6 bits (56), Expect = 6.8
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +3
Query: 87 VLGAPGSGKGTQCSMISKEYDYVHLSAGDLLREERQRPGSE 209
V+G GSGK T CS++ Y++ LS G LR P E
Sbjct: 7 VMGPAGSGKSTYCSVM---YNHC-LSTGRTLRMVNLDPACE 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,221,838
Number of Sequences: 27780
Number of extensions: 222673
Number of successful extensions: 614
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 585
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -