Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14o13
         (507 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF181654-1|AAD55439.1|  652|Drosophila melanogaster BcDNA.LD2383...   276   1e-74
AE013599-854|AAF58945.1|  652|Drosophila melanogaster CG8801-PA ...   276   1e-74
AY113215-1|AAM29220.1|  268|Drosophila melanogaster AT07410p pro...    29   3.6  
BT022918-1|AAY55334.1|  254|Drosophila melanogaster IP08372p pro...    29   4.8  
AE013599-513|AAM68867.2|  254|Drosophila melanogaster CG30383-PA...    29   4.8  

>AF181654-1|AAD55439.1|  652|Drosophila melanogaster BcDNA.LD23830
           protein.
          Length = 652

 Score =  276 bits (677), Expect = 1e-74
 Identities = 129/140 (92%), Positives = 134/140 (95%)
 Frame = +1

Query: 88  MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHD 267
           MSLYNFKKI VVP AKDFIDI+LSKTQRKTPTVVHK YKISRIR FY RKVKYTQQNFHD
Sbjct: 1   MSLYNFKKIMVVPPAKDFIDIMLSKTQRKTPTVVHKGYKISRIRAFYTRKVKYTQQNFHD 60

Query: 268 RLSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYG 447
           RLS+IIQ+FPKLDDVHPFYADLMNVLYDKDHYKL LGQLNTARHL+DNVAKDYVRLLKYG
Sbjct: 61  RLSQIIQDFPKLDDVHPFYADLMNVLYDKDHYKLALGQLNTARHLVDNVAKDYVRLLKYG 120

Query: 448 DSLYRCKQLKRAALGRMATI 507
           DSLYRCKQLK+AALGRMATI
Sbjct: 121 DSLYRCKQLKKAALGRMATI 140


>AE013599-854|AAF58945.1|  652|Drosophila melanogaster CG8801-PA
           protein.
          Length = 652

 Score =  276 bits (677), Expect = 1e-74
 Identities = 129/140 (92%), Positives = 134/140 (95%)
 Frame = +1

Query: 88  MSLYNFKKIAVVPTAKDFIDIILSKTQRKTPTVVHKHYKISRIRGFYIRKVKYTQQNFHD 267
           MSLYNFKKI VVP AKDFIDI+LSKTQRKTPTVVHK YKISRIR FY RKVKYTQQNFHD
Sbjct: 1   MSLYNFKKIMVVPPAKDFIDIMLSKTQRKTPTVVHKGYKISRIRAFYTRKVKYTQQNFHD 60

Query: 268 RLSRIIQEFPKLDDVHPFYADLMNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKYG 447
           RLS+IIQ+FPKLDDVHPFYADLMNVLYDKDHYKL LGQLNTARHL+DNVAKDYVRLLKYG
Sbjct: 61  RLSQIIQDFPKLDDVHPFYADLMNVLYDKDHYKLALGQLNTARHLVDNVAKDYVRLLKYG 120

Query: 448 DSLYRCKQLKRAALGRMATI 507
           DSLYRCKQLK+AALGRMATI
Sbjct: 121 DSLYRCKQLKKAALGRMATI 140


>AY113215-1|AAM29220.1|  268|Drosophila melanogaster AT07410p
           protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
 Frame = -1

Query: 333 EISIKWMDII*LWEFLNNSGQSVVEVLLGIFHFSNIKPTYS*YF-IMLVNDC 181
           +I+ K+ D++  + + N+  +S+V   LG+F   ++K TYS Y   +L N+C
Sbjct: 23  DINSKYYDMVIEFMWSNSFLKSLVYESLGLFDLPDMKQTYSWYVRHILRNEC 74


>BT022918-1|AAY55334.1|  254|Drosophila melanogaster IP08372p
           protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +1

Query: 268 RLSRIIQEFPKLDDVHPFYADL-MNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKY 444
           +LS + Q+  KL D+HPF+  +     Y  D        +   +H I     + ++ +K 
Sbjct: 89  QLSEMAQKRLKLLDLHPFFRRVAQGYQYTPDCDLAARFVVQRQKHFIQ---PEDIKKIKK 145

Query: 445 GDSLYRCK 468
           GDSL RC+
Sbjct: 146 GDSLKRCQ 153


>AE013599-513|AAM68867.2|  254|Drosophila melanogaster CG30383-PA
           protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +1

Query: 268 RLSRIIQEFPKLDDVHPFYADL-MNVLYDKDHYKLGLGQLNTARHLIDNVAKDYVRLLKY 444
           +LS + Q+  KL D+HPF+  +     Y  D        +   +H I     + ++ +K 
Sbjct: 89  QLSEMAQKRLKLLDLHPFFRRVAQGYQYTPDCDLAARFVVQRQKHFIQ---PEDIKKIKK 145

Query: 445 GDSLYRCK 468
           GDSL RC+
Sbjct: 146 GDSLKRCQ 153


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,021,795
Number of Sequences: 53049
Number of extensions: 432239
Number of successful extensions: 781
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)