Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14o12
         (548 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z68014-4|CAA92026.2|  588|Caenorhabditis elegans Hypothetical pr...    28   3.9  
Z29094-16|CAA82345.2|  184|Caenorhabditis elegans Hypothetical p...    28   5.1  
Z81528-1|CAB04282.1|  345|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z78062-4|CAB01498.2|  341|Caenorhabditis elegans Hypothetical pr...    27   8.9  
Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical
           protein F46H5.4 protein.
          Length = 2018

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 20/79 (25%), Positives = 38/79 (48%)
 Frame = +3

Query: 291 SFENYPIVNTAFINSLIVNGFKYNQVDDHVVCEYCEAEIKNWSEDECIEYAHVTLSPYCA 470
           + EN P  N  F + +   G K +  D + +C    +E++  +     +  +  L    A
Sbjct: 494 NIENMPSCNLKFSSFIRQEGDKTSDEDIYRIC----SEMRRTNGKVHKKMFNFELELTLA 549

Query: 471 YANKIAEHESFGDNITINA 527
            +NK  E++S G N+T+N+
Sbjct: 550 GSNKSKEYQSHGSNLTLNS 568


>Z68014-4|CAA92026.2|  588|Caenorhabditis elegans Hypothetical
           protein W04G3.4 protein.
          Length = 588

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 26  ISNIFEYEFVVLEHNLSTVHVINAETKTKLGHINVSLNQNDPNV 157
           +SNI  Y  V+  HN  T+  +N   KT   ++ + L  +  N+
Sbjct: 484 VSNIHSYVLVIQNHNNFTIKDVNLSLKTNDKNVIIRLQDSVNNL 527


>Z29094-16|CAA82345.2|  184|Caenorhabditis elegans Hypothetical
           protein C07A9.9 protein.
          Length = 184

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
 Frame = +3

Query: 354 KYNQVDDHVV----CEYCEAEIKNWSEDECIEYAHVTLSPYCAY 473
           +Y  VDD V     C +C      W  D+C +  H +L  +C Y
Sbjct: 59  EYQYVDDDVPNSERCHFCMKRKGRWMGDDCSD--HSSLCKHCCY 100


>Z81528-1|CAB04282.1|  345|Caenorhabditis elegans Hypothetical
           protein F35E2.1 protein.
          Length = 345

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = -3

Query: 159 STFGSFWFSDTFIWPSLVFVSALM 88
           S+FGS W++ TF+ P L+ +S+++
Sbjct: 272 SSFGSTWYALTFLGPFLMPLSSIL 295


>Z78062-4|CAB01498.2|  341|Caenorhabditis elegans Hypothetical
           protein F16D3.6 protein.
          Length = 341

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = -3

Query: 159 STFGSFWFSDTFIWPSLVFVSALM 88
           S+FGS W++ TF+ P L+ +S+++
Sbjct: 268 SSFGSTWYALTFLGPFLMPLSSIL 291


>Z22177-4|CAA80146.1| 1232|Caenorhabditis elegans Hypothetical
           protein ZK512.5 protein.
          Length = 1232

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +3

Query: 249 IAEHVFDMLLERHGSFENYPIVNTAFINSLIVNGFKYNQVDD-HVV 383
           I +HVF  +      ++  PI   A++    VN   YN +D+ HV+
Sbjct: 240 IVDHVFRTMPPPEKYYKMPPIDRVAYVFYCAVNNKPYNNIDEFHVI 285


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,784,310
Number of Sequences: 27780
Number of extensions: 228860
Number of successful extensions: 739
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)