Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14o04
         (374 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S. cerev...    31   1.2  
L13744-1|AAA58361.1|  568|Homo sapiens AF-9 protein.                   30   2.1  
BX649194-1|CAE46213.1|  298|Homo sapiens hypothetical protein pr...    30   2.1  
AL512635-1|CAH70705.1|  568|Homo sapiens myeloid/lymphoid or mix...    30   2.1  
AL354879-1|CAI14771.1|  568|Homo sapiens myeloid/lymphoid or mix...    30   2.1  
BC036089-1|AAH36089.1|  568|Homo sapiens myeloid/lymphoid or mix...    29   3.7  
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ...    29   3.7  
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ...    29   3.7  
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ...    29   3.7  
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ...    29   3.7  
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ...    29   3.7  
AF118275-1|AAD27584.1|  995|Homo sapiens atrophin-related protei...    29   3.7  
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein...    29   3.7  
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot...    29   3.7  
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.                 29   3.7  
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.     29   3.7  
AF332228-1|AAK13480.1|  230|Homo sapiens melanoma-associated cho...    29   4.9  

>BC006350-1|AAH06350.1|  619|Homo sapiens BUD13 homolog (S.
           cerevisiae) protein.
          Length = 619

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -1

Query: 311 AGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSR 177
           +G S  R +HD+  PS  PR+ R  S+D S PR      PD   R
Sbjct: 211 SGASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPDTSRR 254


>L13744-1|AAA58361.1|  568|Homo sapiens AF-9 protein.
          Length = 568

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/90 (22%), Positives = 39/90 (43%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           + S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K    
Sbjct: 160 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKSAFK 219

Query: 146 IDLRDPNGLRRRVSRFECETRLVKSHCLEP 57
              RD N   +  S+   E + +K   + P
Sbjct: 220 EPSRDHNKSSKESSKKPKENKPLKEEKIVP 249


>BX649194-1|CAE46213.1|  298|Homo sapiens hypothetical protein
           protein.
          Length = 298

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/90 (22%), Positives = 39/90 (43%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           + S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K    
Sbjct: 160 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKSAFK 219

Query: 146 IDLRDPNGLRRRVSRFECETRLVKSHCLEP 57
              RD N   +  S+   E + +K   + P
Sbjct: 220 EPSRDHNKSSKESSKKPKENKPLKEEKIVP 249


>AL512635-1|CAH70705.1|  568|Homo sapiens myeloid/lymphoid or
           mixed-lineage leukemia (trithorax homolog, Drosophila);
           tra protein.
          Length = 568

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/90 (22%), Positives = 39/90 (43%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           + S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K    
Sbjct: 160 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKSAFK 219

Query: 146 IDLRDPNGLRRRVSRFECETRLVKSHCLEP 57
              RD N   +  S+   E + +K   + P
Sbjct: 220 EPSRDHNKSSKESSKKPKENKPLKEEKIVP 249


>AL354879-1|CAI14771.1|  568|Homo sapiens myeloid/lymphoid or
           mixed-lineage leukemia (trithorax homolog, Drosophila);
           tra protein.
          Length = 568

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 20/90 (22%), Positives = 39/90 (43%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           + S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K    
Sbjct: 160 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKSAFK 219

Query: 146 IDLRDPNGLRRRVSRFECETRLVKSHCLEP 57
              RD N   +  S+   E + +K   + P
Sbjct: 220 EPSRDHNKSSKESSKKPKENKPLKEEKIVP 249


>BC036089-1|AAH36089.1|  568|Homo sapiens myeloid/lymphoid or
           mixed-lineage leukemia (trithorax homolog, Drosophila);
           tra protein.
          Length = 568

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 20/90 (22%), Positives = 39/90 (43%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           + S  +  S + S   ++  S++      SST +S+P    + + +  S+D+R  K    
Sbjct: 160 SSSSSSSSSSSSSGSSSSSSSSSSSSSSSSSTSFSKPHKLMKEHKEKPSKDSREHKSAFK 219

Query: 146 IDLRDPNGLRRRVSRFECETRLVKSHCLEP 57
              RD N   +  S+   E + +K   + P
Sbjct: 220 EPSRDHNKSSKESSKKPKENKPLKEEKIVP 249


>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
           dipeptide (RE) repeats protein.
          Length = 1566

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           N    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KKT +
Sbjct: 612 NSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKT 671

Query: 146 IDLRDPN 126
            ++  PN
Sbjct: 672 QEISRPN 678


>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
           dipeptide (RE) repeats protein.
          Length = 1298

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           N    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KKT +
Sbjct: 344 NSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKT 403

Query: 146 IDLRDPN 126
            ++  PN
Sbjct: 404 QEISRPN 410


>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
           dipeptide (RE) repeats protein.
          Length = 1566

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           N    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KKT +
Sbjct: 612 NSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKT 671

Query: 146 IDLRDPN 126
            ++  PN
Sbjct: 672 QEISRPN 678


>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
           dipeptide (RE) repeats protein.
          Length = 1298

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           N    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KKT +
Sbjct: 344 NSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKT 403

Query: 146 IDLRDPN 126
            ++  PN
Sbjct: 404 QEISRPN 410


>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
           dipeptide (RE) repeats protein.
          Length = 1566

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           N    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KKT +
Sbjct: 612 NSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKT 671

Query: 146 IDLRDPN 126
            ++  PN
Sbjct: 672 QEISRPN 678


>AF118275-1|AAD27584.1|  995|Homo sapiens atrophin-related protein
           ARP protein.
          Length = 995

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           N    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KKT +
Sbjct: 41  NSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKT 100

Query: 146 IDLRDPN 126
            ++  PN
Sbjct: 101 QEISRPN 107


>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
           protein.
          Length = 1012

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           N    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KKT +
Sbjct: 58  NSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKT 117

Query: 146 IDLRDPN 126
            ++  PN
Sbjct: 118 QEISRPN 124


>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
           protein.
          Length = 1012

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           N    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KKT +
Sbjct: 58  NSPSAASTSSNDSKAETVKKSAKKVKEEASSLLKSNKRQREKVASDTEEADRTSSKKTKT 117

Query: 146 IDLRDPN 126
            ++  PN
Sbjct: 118 QEISRPN 124


>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
          Length = 1566

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           N    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KKT +
Sbjct: 612 NSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKT 671

Query: 146 IDLRDPN 126
            ++  PN
Sbjct: 672 QEISRPN 678


>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
          Length = 1552

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/67 (28%), Positives = 27/67 (40%)
 Frame = -1

Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDS 147
           N    A  S N S+ +    S    +E  SS   S  R R ++  D    D    KKT +
Sbjct: 598 NSPSAASTSSNDSKAETVKKSAKKVKEEASSPLKSNKRQREKVASDTEEADRTSSKKTKT 657

Query: 146 IDLRDPN 126
            ++  PN
Sbjct: 658 QEISRPN 664


>AF332228-1|AAK13480.1|  230|Homo sapiens melanoma-associated
           chondroitin sulfate proteoglycan-like protein.
          Length = 230

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = -3

Query: 138 PRSKWASTSRLAF*MRNATSKVTLFRASRLSGLHSEHILAGFG*AG 1
           P S WA TS  A  MR+ T+  T       S   S+H L   G AG
Sbjct: 107 PSSTWAPTSTSAVGMRSTTTSQTALAGDSCSRPLSQHSLRPEGPAG 152


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,284,326
Number of Sequences: 237096
Number of extensions: 996026
Number of successful extensions: 3341
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3334
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)