Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14o04
(374 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53139-1|AAS80341.1| 90|Caenorhabditis elegans Hypothetical pr... 27 3.3
AF106581-5|AAC78210.1| 588|Caenorhabditis elegans Hypothetical ... 27 3.3
AF067946-1|AAC17686.3| 275|Caenorhabditis elegans Hypothetical ... 27 3.3
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 27 4.4
DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homo... 27 4.4
AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditi... 27 4.4
AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditi... 27 4.4
AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein. 27 4.4
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 27 5.8
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ... 27 5.8
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 27 5.8
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 26 7.6
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 26 7.6
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 26 7.6
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 26 7.6
AY305829-1|AAR11974.1| 281|Caenorhabditis elegans nuclear recep... 26 7.6
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 26 7.6
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 26 7.6
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 26 7.6
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 26 7.6
AF273803-1|AAG15152.1| 433|Caenorhabditis elegans nuclear recep... 26 7.6
AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopepti... 26 7.6
AF016438-6|AAZ32805.1| 284|Caenorhabditis elegans Nuclear hormo... 26 7.6
AF016438-5|AAB65893.2| 408|Caenorhabditis elegans Nuclear hormo... 26 7.6
AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide ... 26 7.6
>U53139-1|AAS80341.1| 90|Caenorhabditis elegans Hypothetical
protein F18E3.11 protein.
Length = 90
Score = 27.5 bits (58), Expect = 3.3
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -1
Query: 266 STTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVS 105
STT RKSST PRH + + ++ + S L D N L+R+ S
Sbjct: 30 STTQVVSRKSSTSSDAPRHSLNITVG-EAEMCQITRNNSSNSLNDFNCLQRKNS 82
>AF106581-5|AAC78210.1| 588|Caenorhabditis elegans Hypothetical
protein VC5.2 protein.
Length = 588
Score = 27.5 bits (58), Expect = 3.3
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 124 PFGSRRSMLSVFFLTRASRLRRSGYNSVRCRGSE*SVDDFRSWR 255
P R+ +LS FF ++ SR+RRS + R D SW+
Sbjct: 150 PEKRRQELLSEFFASKPSRVRRSTMSRKIAREPTPLTPDMLSWQ 193
>AF067946-1|AAC17686.3| 275|Caenorhabditis elegans Hypothetical
protein W02G9.5 protein.
Length = 275
Score = 27.5 bits (58), Expect = 3.3
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Frame = +1
Query: 1 ASLAESGKDMLTVEPRESGGSKQC-DFTSRV---SHSKRETRRRSPFGSRRSMLSVFFLT 168
+S + +G T + G S+ C DF V + ++ ++R + P S + + + +
Sbjct: 20 SSPSSTGTTQQTFKKINDGFSRDCKDFKRLVRCWNRTEAQSRSKIPKISSKFTICSYNVL 79
Query: 169 RASRLRRSGYNSVRCRGSE*SVDDFRSWRGVVLGRAASCCDLLRLSPAPGDSF 327
+ R+ Y +GS +D WRG+ + D+L L D F
Sbjct: 80 CQKTIARTDYLYRHLQGSAQFLDWEHRWRGLQVELPTFDADILGLQEVQADHF 132
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 27.1 bits (57), Expect = 4.4
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 199 YIRTFGAVMHVLRKKPIASISAIQMGFDVASRVLNA 92
YIRT +VLRKKP S+ D +++NA
Sbjct: 264 YIRTVRGSQYVLRKKPSGSLLPKAHQVDREFKIMNA 299
>DQ178242-1|ABA18181.1| 578|Caenorhabditis elegans Frizzled homolog
protein.
Length = 578
Score = 27.1 bits (57), Expect = 4.4
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 264 HN-TPPGTEVVYRLFRAPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 100
HN +P G EV + N VI+GPSE CTC + + S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF016413-2|ABA54421.1| 578|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform a protein.
Length = 578
Score = 27.1 bits (57), Expect = 4.4
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 264 HN-TPPGTEVVYRLFRAPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 100
HN +P G EV + N VI+GPSE CTC + + S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AF016413-1|ABA54422.1| 550|Caenorhabditis elegans Caenorhabditis
frizzled homologprotein 2, isoform b protein.
Length = 550
Score = 27.1 bits (57), Expect = 4.4
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 264 HN-TPPGTEVVYRLFRAPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 100
HN +P G EV + N VI+GPSE CTC + + S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>AB026113-1|BAA84678.1| 550|Caenorhabditis elegans Cfz2 protein.
Length = 550
Score = 27.1 bits (57), Expect = 4.4
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = -3
Query: 264 HN-TPPGTEVVYRLFRAPTSN*VISGPSEP*CTC*EKNR*HRSPRSKWASTSRLAF 100
HN +P G EV + N VI+GPSE CTC + + S +SK + + A+
Sbjct: 168 HNYSPDGPEVGI----SKIDNEVIAGPSECQCTCNQPFQFVASEKSKVGNVTNCAY 219
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 26.6 bits (56), Expect = 5.8
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = -1
Query: 326 NESPGAGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTEL---YPDLRSRDA--RVK 162
N+S + +R++HD+ ++ PR+ R S D S PR ++ P R+R + R +
Sbjct: 126 NDSDNSPPRPSRNRHDSDKDNSPPRRRRHDS-DNSPPRPSRKIREESPSARNRRSPPRTR 184
Query: 161 KKTDSIDLRDPNGLRRRVS 105
+ D P RR S
Sbjct: 185 RDRHDSDNSPPRNRSRRDS 203
>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
protein Y32B12B.4 protein.
Length = 1528
Score = 26.6 bits (56), Expect = 5.8
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 68 NVTLLVAFR-IQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQF 208
N L+AF + A+ D EAHL+ +RC R H G +I QF
Sbjct: 1134 NEKFLLAFALVLRAKYDHEAHLNLVNRCMRNVC-KTHFGETVDEIFQF 1180
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 26.6 bits (56), Expect = 5.8
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 11/88 (12%)
Frame = -1
Query: 314 GAGLSLNRSQHDAALPSTTPRQERKSSTDYSE--PRHRTELY-----PDLRS----RDAR 168
G S + AA S+ P Q++ S+ Y P+ E Y PD R RD+R
Sbjct: 272 GVRASYDPYTQPAAPVSSYPSQQQPSAGYYDNYAPKTAYESYGRERGPDPRDVRDPRDSR 331
Query: 167 VKKKTDSIDLRDPNGLRRRVSRFECETR 84
+ DS L DP R S + E+R
Sbjct: 332 MPDPRDSRALSDPYAAESRYSEYGYESR 359
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 71 VTLLVAFRIQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQFD 211
+T L+ +I NA E++ D + H+++ SEG ++TQ +
Sbjct: 11 LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 71 VTLLVAFRIQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQFD 211
+T L+ +I NA E++ D + H+++ SEG ++TQ +
Sbjct: 11 LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical protein
C25G4.5 protein.
Length = 1263
Score = 26.2 bits (55), Expect = 7.6
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = -1
Query: 254 RQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVK 75
R KS+ D +E PD ++ D R + + N R+V C T L
Sbjct: 1076 RSPNKSNHDVNETMKALTEMPDYQAADERPNNQPTTSTYGTANTENRKVHINGCHTLL-- 1133
Query: 74 SHCLEPPDSRGSTV 33
S L P G TV
Sbjct: 1134 SLALSMPSRMGETV 1147
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 26.2 bits (55), Expect = 7.6
Identities = 21/74 (28%), Positives = 28/74 (37%)
Frame = -1
Query: 254 RQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVK 75
R KS+ D +E PD ++ D R + + N R+V C T L
Sbjct: 1076 RSPNKSNHDVNETMKALTEMPDYQAADERPNNQPTTSTYGTANTENRKVHINGCHTLL-- 1133
Query: 74 SHCLEPPDSRGSTV 33
S L P G TV
Sbjct: 1134 SLALSMPSRMGETV 1147
>AY305829-1|AAR11974.1| 281|Caenorhabditis elegans nuclear receptor
NHR-56 protein.
Length = 281
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 311 AGLSLNRSQHDAALPSTTPRQERKSSTDYS 222
AG+ N+ QHD L ST+ + SS +S
Sbjct: 68 AGMDANKFQHDRDLISTSTSESSDSSGSFS 97
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 71 VTLLVAFRIQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQFD 211
+T L+ +I NA E++ D + H+++ SEG ++TQ +
Sbjct: 11 LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 71 VTLLVAFRIQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQFD 211
+T L+ +I NA E++ D + H+++ SEG ++TQ +
Sbjct: 11 LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 71 VTLLVAFRIQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQFD 211
+T L+ +I NA E++ D + H+++ SEG ++TQ +
Sbjct: 11 LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 26.2 bits (55), Expect = 7.6
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 71 VTLLVAFRIQNARRDVEAHLDRGDRCYRFFS*HVHHGSEGPDITQFD 211
+T L+ +I NA E++ D + H+++ SEG ++TQ +
Sbjct: 11 LTFLILSKI-NATSTTESYFDSSEEAPNVLLNHLNNESEGEELTQIN 56
>AF273803-1|AAG15152.1| 433|Caenorhabditis elegans nuclear receptor
NHR-56 protein.
Length = 433
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 311 AGLSLNRSQHDAALPSTTPRQERKSSTDYS 222
AG+ N+ QHD L ST+ + SS +S
Sbjct: 96 AGMDANKFQHDRDLISTSTSESSDSSGSFS 125
>AF142441-1|AAF66614.1| 701|Caenorhabditis elegans H+/oligopeptide
symporter OPT-3 protein.
Length = 701
Score = 26.2 bits (55), Expect = 7.6
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = -1
Query: 317 PGAG-LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 141
P G + L R +++ + + + + D P+ RTEL + + + +K ++ ID
Sbjct: 379 PSLGRIYLQRVGNESLISDFRYKSDGRLIGDGMLPKGRTELDAGIYTFNTGLKNESQEID 438
Query: 140 LRDPN-GLRRRVSRFECETRLVK-SHCLEPPDSRGSTVSI 27
+ PN G V R + +VK + +E D+ + V +
Sbjct: 439 ISTPNKGYVMAVFRLKDAVEVVKFDYKVEKTDNGATRVFV 478
>AF016438-6|AAZ32805.1| 284|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 56, isoform b protein.
Length = 284
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 311 AGLSLNRSQHDAALPSTTPRQERKSSTDYS 222
AG+ N+ QHD L ST+ + SS +S
Sbjct: 71 AGMDANKFQHDRDLISTSTSESSDSSGSFS 100
>AF016438-5|AAB65893.2| 408|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 56, isoform a protein.
Length = 408
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -1
Query: 311 AGLSLNRSQHDAALPSTTPRQERKSSTDYS 222
AG+ N+ QHD L ST+ + SS +S
Sbjct: 71 AGMDANKFQHDRDLISTSTSESSDSSGSFS 100
>AF003146-1|AAB54202.1| 701|Caenorhabditis elegans Oligopeptide
transporter protein 3 protein.
Length = 701
Score = 26.2 bits (55), Expect = 7.6
Identities = 23/100 (23%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Frame = -1
Query: 317 PGAG-LSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTELYPDLRSRDARVKKKTDSID 141
P G + L R +++ + + + + D P+ RTEL + + + +K ++ ID
Sbjct: 379 PSLGRIYLQRVGNESLISDFRYKSDGRLIGDGMLPKGRTELDAGIYTFNTGLKNESQEID 438
Query: 140 LRDPN-GLRRRVSRFECETRLVK-SHCLEPPDSRGSTVSI 27
+ PN G V R + +VK + +E D+ + V +
Sbjct: 439 ISTPNKGYVMAVFRLKDAVEVVKFDYKVEKTDNGATRVFV 478
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,113,526
Number of Sequences: 27780
Number of extensions: 156737
Number of successful extensions: 560
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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