Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14k17
(411 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 74 2e-13
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 74 2e-13
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 74 2e-13
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 74 2e-13
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 74 2e-13
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 74 2e-13
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 74 2e-13
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 74 2e-13
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 74 2e-13
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 74 2e-13
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 74 2e-13
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 64 1e-10
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 64 2e-10
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 74.1 bits (174), Expect = 2e-13
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +2
Query: 113 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 280
RN L GV R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 281 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTI 149
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 73.7 bits (173), Expect = 2e-13
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +2
Query: 113 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 280
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 281 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTI 149
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 73.7 bits (173), Expect = 2e-13
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +2
Query: 113 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 280
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 281 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTI 149
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 73.7 bits (173), Expect = 2e-13
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +2
Query: 113 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 280
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 281 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTI 149
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 73.7 bits (173), Expect = 2e-13
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +2
Query: 113 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 280
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 281 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTI 149
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 73.7 bits (173), Expect = 2e-13
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +2
Query: 113 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 280
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 281 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTI 149
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 73.7 bits (173), Expect = 2e-13
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +2
Query: 113 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 280
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 281 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTI 149
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 73.7 bits (173), Expect = 2e-13
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +2
Query: 113 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 280
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 281 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTI 149
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 73.7 bits (173), Expect = 2e-13
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +2
Query: 113 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 280
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 281 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTI 149
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 73.7 bits (173), Expect = 2e-13
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +2
Query: 113 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 280
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 281 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTI 149
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 73.7 bits (173), Expect = 2e-13
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +2
Query: 113 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 280
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 281 TVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
V L++ +YPT++ R S G +PFS+HVR++R ++ GT+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTI 149
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 64.5 bits (150), Expect = 1e-10
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +2
Query: 146 FSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQE 325
+S+ M+ K KY L V K +GG+KNGGTR V L++ +YPT++
Sbjct: 2 YSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 326 KIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
R S G +PFS+HVR++R ++ GT+
Sbjct: 60 VPRKLLSHGKKPFSQHVRKLRASITPGTI 88
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 63.7 bits (148), Expect = 2e-10
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +2
Query: 137 VMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYP 316
+ S+ M+ K KY L V K +GG+KNGGTR V L++ +YP
Sbjct: 60 ICHVSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 317 TQEKIR--ASSGGRPFSKHVRRIRPNLXIGTV 406
T++ R S G +PFS+HVR++R ++ GT+
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRKLRASITPGTI 149
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,334,876
Number of Sequences: 237096
Number of extensions: 1061406
Number of successful extensions: 2208
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2195
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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