Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc14k16
         (459 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-2|CAB02320.1|  344|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AC024805-8|AAK39337.2|  169|Caenorhabditis elegans Hypothetical ...    27   6.6  

>Z80223-2|CAB02320.1|  344|Caenorhabditis elegans Hypothetical
           protein F26D10.8 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 93  WLSKLRSSWFSLMWGTLFSASLNL 22
           WL K  SSW  L++  +F AS+ L
Sbjct: 78  WLDKNSSSWIVLVYTAIFGASMAL 101


>AC024805-8|AAK39337.2|  169|Caenorhabditis elegans Hypothetical
           protein Y51H7C.4 protein.
          Length = 169

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -3

Query: 397 EDAVVLEATASLGWRSX*CSWIRNGXFWIVHDDHWDLCAIVSVVGLI 257
           + A+ L  T  L        W+RNG F I+H D   +   +  +G I
Sbjct: 73  QTAIYLSGTIDLSSEPPIPIWLRNGDFLIMHGDQRLVYHAIPCIGSI 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,833,029
Number of Sequences: 27780
Number of extensions: 114596
Number of successful extensions: 203
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)