Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc14k06
(535 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L22959-1|AAA28870.1| 152|Drosophila melanogaster ribosomal prot... 260 1e-69
BT024929-1|ABE01159.1| 152|Drosophila melanogaster IP16603p pro... 260 1e-69
AE013599-2985|AAM68401.1| 152|Drosophila melanogaster CG8900-PB... 260 1e-69
AE013599-2984|AAF57491.1| 152|Drosophila melanogaster CG8900-PA... 260 1e-69
AY118434-1|AAM48463.1| 152|Drosophila melanogaster RH43343p pro... 256 1e-68
BT022499-1|AAY54915.1| 246|Drosophila melanogaster IP07925p pro... 92 4e-19
X07132-1|CAA30144.1| 643|Drosophila melanogaster protein ( D. m... 28 9.2
X07131-1|CAA30143.1| 616|Drosophila melanogaster protein ( D. m... 28 9.2
X06742-1|CAA29917.1| 656|Drosophila melanogaster Shaker protein. 28 9.2
M17211-1|AAA28417.1| 616|Drosophila melanogaster protein ( D.me... 28 9.2
BT016037-1|AAV36922.1| 447|Drosophila melanogaster LP23579p pro... 28 9.2
AY069030-1|AAL39175.1| 433|Drosophila melanogaster GH01429p pro... 28 9.2
AE014298-2646|AAF48786.3| 655|Drosophila melanogaster CG12348-P... 28 9.2
AE014298-2645|AAF48790.2| 643|Drosophila melanogaster CG12348-P... 28 9.2
AE014298-2644|AAS65395.1| 616|Drosophila melanogaster CG12348-P... 28 9.2
AE014298-2643|AAF48785.3| 616|Drosophila melanogaster CG12348-P... 28 9.2
AE014298-2642|AAN09451.1| 571|Drosophila melanogaster CG12348-P... 28 9.2
AE014298-2418|AAF48619.1| 454|Drosophila melanogaster CG9903-PA... 28 9.2
AE014297-2410|AAF55469.1| 433|Drosophila melanogaster CG7379-PA... 28 9.2
>L22959-1|AAA28870.1| 152|Drosophila melanogaster ribosomal protein
S18 protein.
Length = 152
Score = 260 bits (636), Expect = 1e-69
Identities = 118/135 (87%), Positives = 130/135 (96%)
Frame = +1
Query: 61 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 241 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 420
EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 421 RGMRHYWGLRVRGQH 465
RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135
>BT024929-1|ABE01159.1| 152|Drosophila melanogaster IP16603p
protein.
Length = 152
Score = 260 bits (636), Expect = 1e-69
Identities = 118/135 (87%), Positives = 130/135 (96%)
Frame = +1
Query: 61 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 241 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 420
EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 421 RGMRHYWGLRVRGQH 465
RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135
>AE013599-2985|AAM68401.1| 152|Drosophila melanogaster CG8900-PB,
isoform B protein.
Length = 152
Score = 260 bits (636), Expect = 1e-69
Identities = 118/135 (87%), Positives = 130/135 (96%)
Frame = +1
Query: 61 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 241 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 420
EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 421 RGMRHYWGLRVRGQH 465
RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135
>AE013599-2984|AAF57491.1| 152|Drosophila melanogaster CG8900-PA,
isoform A protein.
Length = 152
Score = 260 bits (636), Expect = 1e-69
Identities = 118/135 (87%), Positives = 130/135 (96%)
Frame = +1
Query: 61 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
MSLVIP+KFQHILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQHILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 241 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 420
EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 421 RGMRHYWGLRVRGQH 465
RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135
>AY118434-1|AAM48463.1| 152|Drosophila melanogaster RH43343p
protein.
Length = 152
Score = 256 bits (628), Expect = 1e-68
Identities = 117/135 (86%), Positives = 129/135 (95%)
Frame = +1
Query: 61 MSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSNIVLKKADIDLDKRAGECT 240
MSLVIP+KFQ ILRIMNTNIDGKRKV AMTAIKGVGRRYSNIVLKKAD+DL KRAGECT
Sbjct: 1 MSLVIPEKFQRILRIMNTNIDGKRKVGIAMTAIKGVGRRYSNIVLKKADVDLTKRAGECT 60
Query: 241 EEEVEKIITIMSNPRQYKIPDWFLNRQKDIVDGKYSQLTSSNLDSKLREDLERLKKIRAH 420
EEEV+K++TI+SNP QYK+P+WFLNRQKDI+DGKY QLTSSNLDSKLR+DLERLKKIR+H
Sbjct: 61 EEEVDKVVTIISNPLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSH 120
Query: 421 RGMRHYWGLRVRGQH 465
RG+RHYWGLRVRGQH
Sbjct: 121 RGLRHYWGLRVRGQH 135
>BT022499-1|AAY54915.1| 246|Drosophila melanogaster IP07925p
protein.
Length = 246
Score = 92.3 bits (219), Expect = 4e-19
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = +1
Query: 157 IKGVGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITIMSNPRQYKIP 300
IKGVGRRYSNIVLKKAD+DL KRAGECTEEEV+K++TI+SNP QYK+P
Sbjct: 1 IKGVGRRYSNIVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
>X07132-1|CAA30144.1| 643|Drosophila melanogaster protein ( D.
melanogaster (latepopul.) Shaker ShB mRNA for put.
K(+)-channel.).
Length = 643
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 7 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 186
FF+ LC+ LT L P+K +MN ID + + +T V
Sbjct: 267 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 325
Query: 187 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 297
+ L KA + DK + + + ++I ++ R +K+
Sbjct: 326 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 363
>X07131-1|CAA30143.1| 616|Drosophila melanogaster protein ( D.
melanogaster adultShaker ShA mRNA for put. K(+)-channel.
).
Length = 616
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 7 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 186
FF+ LC+ LT L P+K +MN ID + + +T V
Sbjct: 279 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 337
Query: 187 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 297
+ L KA + DK + + + ++I ++ R +K+
Sbjct: 338 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 375
>X06742-1|CAA29917.1| 656|Drosophila melanogaster Shaker protein.
Length = 656
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 7 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 186
FF+ LC+ LT L P+K +MN ID + + +T V
Sbjct: 279 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 337
Query: 187 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 297
+ L KA + DK + + + ++I ++ R +K+
Sbjct: 338 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 375
>M17211-1|AAA28417.1| 616|Drosophila melanogaster protein (
D.melanogaster potassiumchannel (Shaker) mRNA, complete
cds. ).
Length = 616
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 7 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 186
FF+ LC+ LT L P+K +MN ID + + +T V
Sbjct: 279 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 337
Query: 187 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 297
+ L KA + DK + + + ++I ++ R +K+
Sbjct: 338 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 375
>BT016037-1|AAV36922.1| 447|Drosophila melanogaster LP23579p
protein.
Length = 447
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 351 LAVFTINNILLPI*EPVWYLILPRIRHDSD 262
+A TIN++L P+W L+L RI ++ D
Sbjct: 237 VATTTINSLLALALLPIWILVLGRILYEDD 266
>AY069030-1|AAL39175.1| 433|Drosophila melanogaster GH01429p
protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 310 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 399
+N ++I+DGK QL + + L+ED +R
Sbjct: 97 VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126
>AE014298-2646|AAF48786.3| 655|Drosophila melanogaster CG12348-PE,
isoform E protein.
Length = 655
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 7 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 186
FF+ LC+ LT L P+K +MN ID + + +T V
Sbjct: 279 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 337
Query: 187 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 297
+ L KA + DK + + + ++I ++ R +K+
Sbjct: 338 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 375
>AE014298-2645|AAF48790.2| 643|Drosophila melanogaster CG12348-PC,
isoform C protein.
Length = 643
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 7 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 186
FF+ LC+ LT L P+K +MN ID + + +T V
Sbjct: 267 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 325
Query: 187 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 297
+ L KA + DK + + + ++I ++ R +K+
Sbjct: 326 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 363
>AE014298-2644|AAS65395.1| 616|Drosophila melanogaster CG12348-PG,
isoform G protein.
Length = 616
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 7 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 186
FF+ LC+ LT L P+K +MN ID + + +T V
Sbjct: 279 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 337
Query: 187 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 297
+ L KA + DK + + + ++I ++ R +K+
Sbjct: 338 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 375
>AE014298-2643|AAF48785.3| 616|Drosophila melanogaster CG12348-PB,
isoform B protein.
Length = 616
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 7 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 186
FF+ LC+ LT L P+K +MN ID + + +T V
Sbjct: 279 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 337
Query: 187 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 297
+ L KA + DK + + + ++I ++ R +K+
Sbjct: 338 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 375
>AE014298-2642|AAN09451.1| 571|Drosophila melanogaster CG12348-PD,
isoform D protein.
Length = 571
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
Frame = +1
Query: 7 FFVSPVLCLGTLVRNLTKMSLVIPDKFQHILRIMNTNIDGKRKVMFAMTAIKGVGRRYSN 186
FF+ LC+ LT L P+K +MN ID + + +T V
Sbjct: 234 FFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNV-IDIIAIIPYFITLATVVAEEEDT 292
Query: 187 IVLKKADID-LDKRAGECTEEEVEKIITIMSNPRQYKI 297
+ L KA + DK + + + ++I ++ R +K+
Sbjct: 293 LNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKL 330
>AE014298-2418|AAF48619.1| 454|Drosophila melanogaster CG9903-PA
protein.
Length = 454
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 351 LAVFTINNILLPI*EPVWYLILPRIRHDSD 262
+A TIN++L P+W L+L RI ++ D
Sbjct: 244 VATTTINSLLALALLPIWILVLGRILYEDD 273
>AE014297-2410|AAF55469.1| 433|Drosophila melanogaster CG7379-PA
protein.
Length = 433
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 310 LNRQKDIVDGKYSQLTSSNLDSKLREDLER 399
+N ++I+DGK QL + + L+ED +R
Sbjct: 97 VNHMQEIIDGKLRQLDTDQQNLDLKEDRDR 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,271,666
Number of Sequences: 53049
Number of extensions: 516922
Number of successful extensions: 1572
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1572
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -